RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SLC3A1Q07837 685 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 SWI5Q1ZZU3 235 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 MBNL2Q5VZF2 373 aaKnown RBP8.46□□□□□ -1.06
SF3A1-207ENST00000471342 SP5Q6BEB4 398 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-207ENST00000471342 C11orf71Q6IPW1 123 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 ARL9Q6T311 187 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 LRRTM1Q86UE6 522 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 ALDH16A1Q8IZ83 802 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 OR5AS1Q8N127 324 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 SVOPQ8N4V2 548 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 ZNF283Q8N7M2 679 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 OR1J2Q8NGS2 313 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 KLF14Q8TD94 323 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-207ENST00000471342 UBASH3BQ8TF42 649 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 FAM222BQ8WU58 562 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 FCGR1BQ92637 280 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 SPTSSAQ969W0 71 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 APOBEC3DQ96AK3 386 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-207ENST00000471342 MUCL1Q96DR8 90 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 MED18Q9BUE0 208 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 FUNDC2Q9BWH2 189 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 OR2J1Q9GZK6 312 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 PLEKHF2Q9H8W4 249 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 BRD7Q9NPI1 651 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 GPR84Q9NQS5 396 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 RAI1Q7Z5J4 1906 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-207ENST00000471342 AKAP9Q99996 3911 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 TRBV2A0A0J9YWF9 115 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 IQCMA0A1B0GVH7 501 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 LOC107986453A0A1B0GWG9 222 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 ABCD4O14678 606 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 MYL12BO14950 172 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 CTAG2O75638 210 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 GABARAPO95166 117 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 TACSTD2P09758 323 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 UCHL1P09936 223 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 PRF1P14222 555 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 APLNRP35414 380 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 KIR2DL3P43628 341 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 GSK3AP49840 483 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 KRTAP10-9P60411 292 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 PPP1CBP62140 327 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 PLP2Q04941 152 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 MRPL28Q13084 256 aaKnown RBP8.45□□□□□ -1.06
SF3A1-207ENST00000471342 UBE2V2Q15819 145 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 TBC1D28Q2M2D7 210 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 ODF4Q2M2E3 257 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 BEX5Q5H9J7 111 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 SPATA46Q5T0L3 261 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 SSX8Q7RTT4 187 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 WDR86Q86TI4 376 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 ANKRD13BQ86YJ7 626 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 PARP16Q8N5Y8 322 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 HPSE2Q8WWQ2 592 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 TMEM203Q969S6 136 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 CMBLQ96DG6 245 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 DERL3Q96Q80 235 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 KCNS3Q9BQ31 491 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 CENPOQ9BU64 300 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 MRPL37Q9BZE1 423 aaKnown RBP8.45□□□□□ -1.06
SF3A1-207ENST00000471342 KCNN2Q9H2S1 579 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 OR51B6Q9H340 312 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 ZCCHC4Q9H5U6 513 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 ZNF442Q9H7R0 627 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 MOB1AQ9H8S9 216 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 TRIM36Q9NQ86 728 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 ZNF275Q9NSD4 429 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-207ENST00000471342 PTTG3PQ9NZH4 202 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 ZNF281Q9Y2X9 895 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 PLCE1Q9P212 2302 aa8.45□□□□□ -1.06
SF3A1-207ENST00000471342 CSMD1Q96PZ7 3565 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 TRDV1A0A1B0GX56 115 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 A1L4Q6 167 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 A6NIN4 97 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 TMEM212A6NML5 194 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 A6NNC1 897 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 IQCF6A8MYZ5 107 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 H3BSH0 61 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 CCRL2O00421 344 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 MLNRO43193 412 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 IGHV3-13P01766 116 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 LCATP04180 440 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 CD36P16671 472 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 ACHEP22303 614 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 PSMB9P28065 219 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 FGF9P31371 208 aaPredicted RBP8.44□□□□□ -1.06
SF3A1-207ENST00000471342 GABRA5P31644 462 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 DDOSTP39656 456 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 TAS2R43P59537 309 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 ZNF829Q3KNS6 432 aaPredicted RBP8.44□□□□□ -1.06
SF3A1-207ENST00000471342 ZNF672Q499Z4 452 aaPredicted RBP8.44□□□□□ -1.06
SF3A1-207ENST00000471342 ZMAT1Q5H9K5 638 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 DMRTC1Q5HYR2 192 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 FAM166AQ6J272 317 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 TMEM108Q6UXF1 575 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 MEX3BQ6ZN04 569 aaKnown RBP8.44□□□□□ -1.06
SF3A1-207ENST00000471342 C11orf53Q8IXP5 236 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 OR52H1Q8NGJ2 320 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 OR51A2Q8NGJ7 313 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 OR1J1Q8NGS3 322 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms