RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 RPN2P04844 631 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 ARG1P05089 322 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 IFI30P13284 250 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 TMED10P49755 219 aaKnown RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 AIF1P55008 147 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 UBE2HP62256 183 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 IL24Q13007 206 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 BTN1A1Q13410 526 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 PNOCQ13519 176 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 SLC9A3R2Q15599 337 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 SLC25A35Q3KQZ1 300 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 SP6Q3SY56 376 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 LUZP6Q538Z0 58 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 CRYBG3Q68DQ2 2970 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 AMMECR1LQ6DCA0 310 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 APOBEC3HQ6NTF7 200 aaKnown RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 FAM131AQ6UXB0 335 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 SPNS3Q6ZMD2 512 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 GTPBP8Q8N3Z3 284 aaPredicted RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 PRELID2Q8N945 189 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 SPATA4Q8NEY3 305 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 OR52E2Q8NGJ4 325 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 OR8J1Q8NGP2 316 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 CMTM2Q8TAZ6 248 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 APH1BQ8WW43 257 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 CCDC126Q96EE4 140 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 KCNS1Q96KK3 526 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 ATP5SQ99766 215 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 ZNF649Q9BS31 505 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 TMEM243Q9BU79 118 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 NUDT9Q9BW91 350 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 VCX2Q9H322 139 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 MYOZ1Q9NP98 299 aaPredicted RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 MED4Q9NPJ6 270 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 ASF1BQ9NVP2 202 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 TAS2R5Q9NYW4 299 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 IL37Q9NZH6 218 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 PDP1Q9P0J1 537 aaPredicted RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 SUN2Q9UH99 717 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 MCTS1Q9ULC4 181 aaKnown RBP0.42□□□□□ -2.34
UBXN4-207ENST00000471246 LRRC42Q9Y546 428 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 TENM3Q9P273 2699 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 CFAP54Q96N23 3096 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 HMGXB3Q12766 1538 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 DOCK10Q96BY6 2186 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 HTTP42858 3142 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 FSIP2Q5CZC0 6907 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 MEGF8Q7Z7M0 2845 aa0.42□□□□□ -2.34
UBXN4-207ENST00000471246 RPRD2Q5VT52 1461 aaKnown RBP0.41□□□□□ -2.34
UBXN4-207ENST00000471246 TENM2Q9NT68 2774 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 SPTBN2O15020 2390 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 MKI67P46013 3256 aaKnown RBP0.41□□□□□ -2.34
UBXN4-207ENST00000471246 USP34Q70CQ2 3546 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 GOLGA6L4A6NEF3 574 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 D6RAR5 112 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 H7C1H1 209 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 TNFRSF11BO00300 401 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 TAAR5O14804 337 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 RAB29O14966 203 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 GUCA1CO95843 209 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 MT-ND4P03905 459 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 MMP7P09237 267 aaPredicted RBP0.41□□□□□ -2.34
UBXN4-207ENST00000471246 CT45A6P0DMU7 189 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 CT45A5P0DMU8 189 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 CT45A7P0DMV0 189 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 HSPD1P10809 573 aaKnown RBP0.41□□□□□ -2.34
UBXN4-207ENST00000471246 MCF2P10911 925 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 CBR1P16152 277 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 CTRB1P17538 263 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 GLRA2P23416 452 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 FOXN2P32314 431 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 ACOT2P49753 483 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 TAS2R43P59537 309 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 TAS2R46P59540 309 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 SP4Q02446 784 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 BST2Q10589 180 aaKnown RBP0.41□□□□□ -2.34
UBXN4-207ENST00000471246 BIKQ13323 160 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 GPM6BQ13491 265 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 DGCR6Q14129 220 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 ZNF266Q14584 549 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 NCF4Q15080 339 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 ZNF141Q15928 474 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 VPS26BQ4G0F5 336 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 CT45A1Q5HYN5 189 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 ZNF470Q6ECI4 717 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 RTL4Q6ZR62 310 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 MRPL55Q7Z7F7 128 aaKnown RBP0.41□□□□□ -2.34
UBXN4-207ENST00000471246 FAM71AQ8IYT1 594 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 BHLHE23Q8NDY6 225 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 OR1L1Q8NH94 360 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 CT45A3Q8NHU0 189 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 MUC7Q8TAX7 377 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 RAB3IL1Q8TBN0 382 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 OR51E1Q8TCB6 317 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 KIFAP3Q92845 792 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 GHSRQ92847 366 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 EEF1AKMT3Q96AZ1 226 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 IGF2BP2-AS1Q96M15 143 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 CSPG4P5Q96PW8 444 aa0.41□□□□□ -2.34
UBXN4-207ENST00000471246 SLC29A1Q99808 456 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms