RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 OMPP47874 163 aa11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 PRSS12P56730 875 aa11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 TAF9Q16594 264 aa11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 SFRP4Q6FHJ7 346 aaPredicted RBP11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 CYP2R1Q6VVX0 501 aa11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 COLCA1Q6ZS62 124 aa11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 ZDHHC21Q8IVQ6 265 aa11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 AQP12AQ8IXF9 295 aa11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 WDFY2Q96P53 400 aa11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 TSSK2Q96PF2 358 aa11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 ATF6BQ99941 703 aa11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 RBM4BQ9BQ04 359 aaKnown RBP11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 THTPAQ9BU02 230 aa11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 ADAT1Q9BUB4 502 aaKnown RBP11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 SRA1Q9HD15 236 aaKnown RBP11.51□□□□□ -0.57
SEMA3F-208ENST00000470737 IGHV1-69DA0A0B4J2H0 117 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 UNC119BA6NIH7 251 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 C3orf80F5H4A9 247 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 GPR137BO60478 399 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 DNAJC8O75937 253 aaPredicted RBP11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 TXNDC12O95881 172 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 IGHV1-69P01742 117 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 HLA-DQA2P01906 255 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 ACSM4P0C7M7 580 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 CA6P23280 308 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 GGT2P36268 569 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 IFNGR2P38484 337 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 TPTEP56180 551 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 MPPED2Q15777 294 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 FAM98BQ52LJ0 330 aaKnown RBP11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 CLEC12AQ5QGZ9 265 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 SMARCD3Q6STE5 483 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 GDPGP1Q6ZNW5 385 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 LINC00346Q8IVM7 164 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 LRTOMTQ8WZ04 291 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 LHX4Q969G2 390 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 ERMAPQ96PL5 475 aaPredicted RBP11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 TBX15Q96SF7 602 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 DPAGT1Q9H3H5 408 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 TCF7L1Q9HCS4 588 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 CTSZQ9UBR2 303 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 B9D1Q9UPM9 204 aa11.5□□□□□ -0.57
SEMA3F-208ENST00000470737 IGLV1-36A0A0B4J1U3 117 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 TRBV4-1A0A0J9YWV2 114 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 BTBD17A6NE02 478 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 OOEPA6NGQ2 149 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 GGT3PA6NGU5 568 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 SLC22A31A6NKX4 558 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 GSC2O15499 205 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 GMDSO60547 372 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 PPP1R3DO95685 299 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 ECDO95905 644 aaPredicted RBP11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 RAP2AP10114 183 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 MMP9P14780 707 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 MZT1Q08AG7 82 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 SEC23BQ15437 767 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 ASPHD2Q6ICH7 369 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 SLC18B1Q6NT16 456 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 CFAP77Q6ZQR2 320 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 RHOUQ7L0Q8 258 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 PLPP7Q8NBV4 271 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 SLC26A10Q8NG04 563 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 LINC01006Q8NI28 216 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 FANK1Q8TC84 345 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 SPTSSAQ969W0 71 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 CLPTM1LQ96KA5 538 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 LRGUKQ96M69 825 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 CAB39Q9Y376 341 aaPredicted RBP11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 FAM96BQ9Y3D0 163 aa11.49□□□□□ -0.57
SEMA3F-208ENST00000470737 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 hCG_1807616A0A1W2PRN6 198 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 A6NLC8 198 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 CD300LBA8K4G0 201 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 M0R135 149 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 DCTN6O00399 190 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 CLPXO76031 633 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 DIRAS1O95057 198 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 IGHV4-59P01825 116 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 NOS3P29474 1203 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 RRM2P31350 389 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 SLC6A6P31641 620 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 ARF6P62330 175 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 SPIBQ01892 262 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 RSPO1Q2MKA7 263 aaPredicted RBP11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 KRTAP27-1Q3LI81 207 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 SPERTQ8NA61 448 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 ZNF799Q96GE5 643 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 SIRPDQ9H106 197 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 RPRD1BQ9NQG5 326 aaKnown RBP11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 C1orf123Q9NWV4 160 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 LYVE1Q9Y5Y7 322 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 V9GYQ6 96 aa11.48□□□□□ -0.57
SEMA3F-208ENST00000470737 A0A0U1RQK1 487 aa11.47□□□□□ -0.57
SEMA3F-208ENST00000470737 GYPAP02724 150 aa11.47□□□□□ -0.57
SEMA3F-208ENST00000470737 ZNF823P16415 610 aa11.47□□□□□ -0.57
SEMA3F-208ENST00000470737 IER3P46695 156 aa11.47□□□□□ -0.57
SEMA3F-208ENST00000470737 GSSP48637 474 aa11.47□□□□□ -0.57
SEMA3F-208ENST00000470737 FXYD6P3P58550 94 aa11.47□□□□□ -0.57
SEMA3F-208ENST00000470737 KRTAP10-3P60369 221 aa11.47□□□□□ -0.57
SEMA3F-208ENST00000470737 TSPAN31Q12999 210 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms