RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 UQCC3Q6UW78 93 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 GLIPR1L1Q6UWM5 242 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 OR8B12Q8NGG6 310 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 OR2I1PQ8NGU4 316 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 OR4K15Q8NH41 348 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 OR6X1Q8NH79 312 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 TERB2Q8NHR7 220 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 THAP3Q8WTV1 239 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-209ENST00000470026 DNASE2BQ8WZ79 361 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 ARPC5LQ9BPX5 153 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 ZNF471Q9BX82 626 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-209ENST00000470026 PPP4R1LQ9P1A2 415 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 ZNF319Q9P2F9 582 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 MBD2Q9UBB5 411 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 SHPKQ9UHJ6 478 aa12.08□□□□□ -0.48
BRCA1-209ENST00000470026 MRPS28Q9Y2Q9 187 aaKnown RBP12.08□□□□□ -0.48
BRCA1-209ENST00000470026 LOC100509620A0A075B734 347 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 LOC102725191A0A1B0GVB3 256 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 SMAD9O15198 467 aaKnown RBP12.07□□□□□ -0.48
BRCA1-209ENST00000470026 CDC14BO60729 498 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 DKK1O94907 266 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 IFNA6P05013 189 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 MYF5P13349 255 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 ABOP16442 354 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 ZNF20P17024 532 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 BCKDHBP21953 392 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 PSMB6P28072 239 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 TMEM50BP56557 158 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 CLRN1P58418 232 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 NAAAQ02083 359 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 MFAP5Q13361 173 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 MICBQ29980 383 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 NKAIN1Q4KMZ8 207 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 TMEM128Q5BJH2 165 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 TMEM104Q8NE00 496 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 OR5AP2Q8NGF4 316 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 OR5L2Q8NGL0 311 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 KCNG3Q8TAE7 436 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 TMEM230Q96A57 120 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 OCSTAMPQ9BR26 566 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 AIFM2Q9BRQ8 373 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 SOX7Q9BT81 388 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 PIGMQ9H3S5 423 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.07□□□□□ -0.48
BRCA1-209ENST00000470026 SDHAF3Q9NRP4 125 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 WIF1Q9Y5W5 379 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 TEX13DA0A0J9YY54 714 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-209ENST00000470026 RAB19A4D1S5 217 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 MFNGO00587 321 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 PMP2P02689 132 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 LYL1P12980 280 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 CTSSP25774 331 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 ZNF121P58317 390 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-209ENST00000470026 GABREP78334 506 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 SMAD4Q13485 552 aaKnown RBP12.07□□□□□ -0.48
BRCA1-209ENST00000470026 FAM189A2Q15884 450 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 BEX5Q5H9J7 111 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 TMEM71Q6P5X7 295 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 ZNF574Q6ZN55 896 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-209ENST00000470026 PEG10Q86TG7 708 aaKnown RBP12.07□□□□□ -0.48
BRCA1-209ENST00000470026 FAM89BQ8N5H3 189 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 BPIFCQ8NFQ6 507 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 OR2M3Q8NG83 312 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 OR2AJ1Q8NGZ0 328 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 MARCH1Q8TCQ1 289 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 PIK3IP1Q96FE7 263 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 CDC6Q99741 560 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 RNF126Q9BV68 326 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 TAS2R3Q9NYW6 316 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 KLRF1Q9NZS2 232 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 PRELID1Q9Y255 219 aa12.07□□□□□ -0.48
BRCA1-209ENST00000470026 SOCS1O15524 211 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 IGLV3-1P01715 115 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 APOC3P02656 99 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 AKR1C4P17516 323 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 ANOS1P23352 680 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 VAMP1P23763 118 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 SERPINF1P36955 418 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 CYCSP99999 105 aaKnown RBP12.06□□□□□ -0.48
BRCA1-209ENST00000470026 ACY1Q03154 408 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 NSUN5P2Q63ZY6 315 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 ZNF385CQ66K41 422 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-209ENST00000470026 LHFPL1Q86WI0 220 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 ZNF101Q8IZC7 436 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 ABCA7Q8IZY2 2146 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 INO80EQ8NBZ0 244 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-209ENST00000470026 CASTOR1Q8WTX7 329 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 MARC2Q969Z3 335 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 RAB3CQ96E17 227 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 OXGR1Q96P68 337 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 C5orf66Q9H5L9 145 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 CHMP1AQ9HD42 196 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-209ENST00000470026 GPR84Q9NQS5 396 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 TMEM100Q9NV29 134 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 MYOTQ9UBF9 498 aa12.06□□□□□ -0.48
BRCA1-209ENST00000470026 FOXI3A8MTJ6 420 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-209ENST00000470026 ZNF814B7Z6K7 855 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 MBTPS2O43462 519 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 RAD51DO75771 328 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 TIAF1O95411 115 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms