RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 STX12Q86Y82 276 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 CMIPQ8IY22 773 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 OR10D3Q8NH80 312 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 FAM222BQ8WU58 562 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 WDR89Q96FK6 387 aaPredicted RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 SLC35A4Q96G79 324 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 NKX6-2Q9C056 277 aaPredicted RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 EIF5A2Q9GZV4 153 aaKnown RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 SEC61A2Q9H9S3 476 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 RPS10P5Q9NQ39 176 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 MAN2C1Q9NTJ4 1040 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 TAS2R8Q9NYW2 309 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF629Q9UEG4 869 aaPredicted RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 GPR160Q9UJ42 338 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF281Q9Y2X9 895 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF337Q9Y3M9 751 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ATP23Q9Y6H3 246 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 TMEM82A0PJX8 343 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF878C9JN71 531 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 CDC42EP2O14613 210 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 MSTNO14793 375 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 TO15178 435 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 FBXO24O75426 580 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 IGHV3-9P01782 118 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 LPLP06858 475 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 CSF1P09603 554 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 RFPL3SP0C7P2 107 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 UBBP0CG47 229 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 UBCP0CG48 685 aaKnown RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 CCNOP22674 350 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 APOBEC1P41238 236 aaKnown RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 SUMO3P55854 103 aaPredicted RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 IL13RA1P78552 427 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 RBM39Q14498 530 aaKnown RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 RAB35Q15286 201 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 CARD17Q5XLA6 110 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 HIST2H2BCQ6DN03 193 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF836Q6ZNA1 936 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 TMEM91Q6ZNR0 172 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 RNF165Q6ZSG1 346 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 CAMKMTQ7Z624 323 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 BPIFB2Q8N4F0 458 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ACBD4Q8NC06 268 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 SMIM3Q9BZL3 60 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 PLEKHA1Q9HB21 404 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 BIN3Q9NQY0 253 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 SIRT4Q9Y6E7 314 aaPredicted RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 A0A1W2PNR3 127 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 C1orf196B1AJZ1 125 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 H3BMH7 237 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 GABARAPH6UMI1 98 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 IFNGR1P15260 489 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 HIST1H1CP16403 213 aaKnown RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 POLR2HP52434 150 aaKnown RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 GUCA2AQ02747 115 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 CEBPEQ15744 281 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 PRSS53Q2L4Q9 553 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 LAMTOR1Q6IAA8 161 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 DPY19L4Q7Z388 723 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 GRINAQ7Z429 371 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 FBXL14Q8N1E6 418 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 SVBPQ8N300 66 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 PLPP7Q8NBV4 271 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 OR4C3Q8NH37 302 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 RNASE11Q8TAA1 199 aaKnown RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 GPR148Q8TDV2 347 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ST8SIA1Q92185 356 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 YIPF5Q969M3 257 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ARL11Q969Q4 196 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 S100PBPQ96BU1 408 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 VSTM2LQ96N03 204 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 USB1Q9BQ65 265 aaKnown RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 PARP12Q9H0J9 701 aaKnown RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ISYNA1Q9NPH2 558 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 DEPPQ9NTK1 212 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 C20orf141Q9NUB4 165 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ELF5Q9UKW6 265 aaPredicted RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 SSUH2Q9Y2M2 353 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 CSPG4Q6UVK1 2322 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 MUC3AQ02505 3323 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 TNRC6BQ9UPQ9 1833 aaKnown RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 A0A1B0GWA3 101 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 SHISA3A0PJX4 238 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 LINC00862A6NCI5 91 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 KDM4EB2RXH2 506 aaPredicted RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ALG1L2C9J202 215 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 SHOXO15266 292 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 CRHP06850 196 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 SNRNP70P08621 437 aaKnown RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 GIPP09681 153 aaPredicted RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 CD79AP11912 226 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF84P51523 738 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ACTBP60709 375 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 ACTG1P63261 375 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 IGLV3-21P80748 117 aaPredicted RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 USF2Q15853 346 aaPredicted RBP5.32□□□□□ -1.56
SHQ1-205ENST00000468371 OR7E24Q6IFN5 339 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 UEVLDQ8IX04 471 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 OR2L13Q8N349 312 aa5.32□□□□□ -1.56
SHQ1-205ENST00000468371 MAFIPQ8WZ33 124 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms