RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 LRRC18Q8N456 261 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 MS4A15Q8N5U1 240 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 ZBTB34Q8NCN2 500 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 OR5AK2Q8NH90 309 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 SLCO5A1Q9H2Y9 848 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 C1orf198Q9H425 327 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 CACNA1AO00555 2505 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 DOCK7Q96N67 2140 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 RELNP78509 3460 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 SLC22A20A6NK97 555 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 A8MXE2 369 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 MKRN2OSH3BPM6 223 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 APOC1P02654 83 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 MMP7P09237 267 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-208ENST00000468300 BMP4P12644 408 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 MTNR1BP49286 362 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 LUMP51884 338 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-208ENST00000468300 TMPRSS3P57727 454 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 KCTD18Q6PI47 426 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-208ENST00000468300 SKA3Q8IX90 412 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 OR2C3Q8N628 320 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 C9orf106Q8NAJ2 232 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 OR5M9Q8NGP3 310 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 GPR137Q96N19 417 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 ATF6BQ99941 703 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 MRPL37Q9BZE1 423 aaKnown RBP7.23□□□□□ -1.25
BRCA1-208ENST00000468300 OPA3Q9H6K4 179 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 EXO5Q9H790 373 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 UFSP2Q9NUQ7 469 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 PRSS50Q9UI38 385 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 EMC9Q9Y3B6 208 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 SMG1Q96Q15 3661 aaKnown RBP7.23□□□□□ -1.25
BRCA1-208ENST00000468300 A0A075B6Q4 140 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 F8W036 122 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 CTDSP2O14595 271 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 LMX1BO60663 402 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 MRPL33O75394 65 aaKnown RBP7.23□□□□□ -1.25
BRCA1-208ENST00000468300 TOXO94900 526 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 IGLV3-1P01715 115 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 TTRP02766 147 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 ISG15P05161 165 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 PATE4P0C8F1 98 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 OCM2P0CE71 109 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 OCMP0CE72 109 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-208ENST00000468300 B4GALT1P15291 398 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 RIDAP52758 137 aaKnown RBP7.23□□□□□ -1.25
BRCA1-208ENST00000468300 HNRNPA0Q13151 305 aaKnown RBP7.23□□□□□ -1.25
BRCA1-208ENST00000468300 TRAT1Q6PIZ9 186 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 LINC00299Q6ZSB3 139 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 FAM220AQ7Z4H9 259 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 SLC22A24Q8N4F4 322 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 ASCC1Q8N9N2 400 aaKnown RBP7.23□□□□□ -1.25
BRCA1-208ENST00000468300 HAVCR2Q8TDQ0 301 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 PNPLA2Q96AD5 504 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 MRPL48Q96GC5 212 aaKnown RBP7.23□□□□□ -1.25
BRCA1-208ENST00000468300 KCNS3Q9BQ31 491 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 NEURL2Q9BR09 285 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 MIXL1Q9H2W2 232 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 MMP27Q9H306 513 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 NOX4Q9NPH5 578 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 TRAV1-2A0A0B4J238 106 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 IQCMA0A1B0GVH7 501 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 TMEM210A6NLX4 147 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 TMEM212A6NML5 194 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 C22orf46C9J442 243 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 TOR1AO14656 332 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 SYNGR3O43761 229 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 CST2P09228 141 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 FAM87AP0C7U9 286 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 ADRA2CP18825 462 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 CRYGSP22914 178 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 ODF4Q2M2E3 257 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 ACSF3Q4G176 576 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-208ENST00000468300 LRRTM1Q86UE6 522 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 MCFD2Q8NI22 146 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 FOXB1Q99853 325 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 SOX7Q9BT81 388 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 NOX3Q9HBY0 568 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 GP6Q9HCN6 339 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 FAM215AQ9Y5M1 114 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 POMT1Q9Y6A1 747 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 IGF2RP11717 2491 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 TRAV8-7A0A075B6U6 113 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 A0A1B0GTI1 187 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 ANKRD61A6NGH8 418 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF878C9JN71 531 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 GATBO75879 557 aaKnown RBP7.22□□□□□ -1.25
BRCA1-208ENST00000468300 IL18BPO95998 194 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 TPOP07202 933 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 ITGA5P08648 1049 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 NPR2P20594 1047 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 TNFSF4P23510 183 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 KIR2DL2P43627 348 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-208ENST00000468300 RORCP51449 518 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 FOXF2Q12947 444 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 TSC22D1Q15714 1073 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 SLC25A35Q3KQZ1 300 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 NRN1LQ496H8 165 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 RPRMLQ8N4K4 120 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 OR10H5Q8NGA6 315 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms