RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SPARTQ8N0X7 666 aa13.04□□□□□ -0.32
SNIP1-202ENST00000468040 CCDC54Q8NEL0 328 aa13.04□□□□□ -0.32
SNIP1-202ENST00000468040 OR51E1Q8TCB6 317 aa13.04□□□□□ -0.32
SNIP1-202ENST00000468040 FCGR1BQ92637 280 aa13.04□□□□□ -0.32
SNIP1-202ENST00000468040 SYT3Q9BQG1 590 aa13.04□□□□□ -0.32
SNIP1-202ENST00000468040 COMMD4Q9H0A8 199 aa13.04□□□□□ -0.32
SNIP1-202ENST00000468040 ACOT13Q9NPJ3 140 aa13.04□□□□□ -0.32
SNIP1-202ENST00000468040 GPR84Q9NQS5 396 aa13.04□□□□□ -0.32
SNIP1-202ENST00000468040 CBLN4Q9NTU7 201 aa13.04□□□□□ -0.32
SNIP1-202ENST00000468040 CGGBP1Q9UFW8 167 aaPredicted RBP13.04□□□□□ -0.32
SNIP1-202ENST00000468040 PURGQ9UJV8 347 aaKnown RBP13.04□□□□□ -0.32
SNIP1-202ENST00000468040 ABCA4P78363 2273 aa13.04□□□□□ -0.32
SNIP1-202ENST00000468040 UTP20O75691 2785 aaKnown RBP13.03□□□□□ -0.32
SNIP1-202ENST00000468040 PTPN13Q12923 2485 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 A0A087WXM4 84 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 hCG_38984A0A1B0GV85 526 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 A0A1B0GVI7 797 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 GGT3PA6NGU5 568 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 OR4C45A6NMZ5 311 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 OGG1O15527 345 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 TIMM8AO60220 97 aaPredicted RBP13.03□□□□□ -0.32
SNIP1-202ENST00000468040 MTRF1O75570 445 aaKnown RBP13.03□□□□□ -0.32
SNIP1-202ENST00000468040 DANCRP0C864 163 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 PRF1P14222 555 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 ATP6V1B1P15313 513 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 LIPAP38571 399 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 DDOSTP39656 456 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 KIR3DL2P43630 455 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 MAP2K4P45985 399 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 GTF2A1P52655 376 aaPredicted RBP13.03□□□□□ -0.32
SNIP1-202ENST00000468040 FAM3AP98173 230 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 EMX1Q04741 257 aaPredicted RBP13.03□□□□□ -0.32
SNIP1-202ENST00000468040 TMEM244Q5VVB8 128 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 XAF1Q6GPH4 301 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 DOK3Q7L591 496 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 DTX2Q86UW9 622 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 LRP11Q86VZ4 500 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 FTMTQ8N4E7 242 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 ZNF676Q8N7Q3 588 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 TSPAN14Q8NG11 270 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 OR5AK2Q8NH90 309 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 RPS4Y2Q8TD47 263 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 PPP1R14AQ96A00 147 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 SMIM19Q96E16 107 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 LYZL4Q96KX0 146 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 OR5M11Q96RB7 305 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 CYSLTR2Q9NS75 346 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 ST6GALNAC2Q9UJ37 374 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 EDARQ9UNE0 448 aa13.03□□□□□ -0.32
SNIP1-202ENST00000468040 RAI1Q7Z5J4 1906 aaPredicted RBP13.03□□□□□ -0.32
SNIP1-202ENST00000468040 LOC390937A0A1W2PQ73 354 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 PLSCR5A0PG75 271 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 CD300LBA8K4G0 201 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 IQCF6A8MYZ5 107 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 M0R233 179 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 P2RY10O00398 339 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 SYT7O43581 403 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 DHRS3O75911 302 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 ZFPL1O95159 310 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 CLPTM1O96005 669 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 LALBAP00709 142 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 SOD3P08294 240 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 ZNF12P17014 697 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 CCL1P22362 96 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 GSK3AP49840 483 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 MLLT11Q13015 90 aaPredicted RBP13.02□□□□□ -0.33
SNIP1-202ENST00000468040 OR8B8Q15620 311 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 NKPD1Q17RQ9 610 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 SWI5Q1ZZU3 235 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 ODF4Q2M2E3 257 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 ZMAT1Q5H9K5 638 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 DMKNQ6E0U4 476 aaPredicted RBP13.02□□□□□ -0.33
SNIP1-202ENST00000468040 OR2T2Q6IF00 324 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 CSNK2A3Q8NEV1 391 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 FAM71F1Q96KD3 344 aaPredicted RBP13.02□□□□□ -0.33
SNIP1-202ENST00000468040 TRAF4Q9BUZ4 470 aaPredicted RBP13.02□□□□□ -0.33
SNIP1-202ENST00000468040 VCX3AQ9NNX9 186 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 ISYNA1Q9NPH2 558 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 TAAR3PQ9P1P4 343 aa13.02□□□□□ -0.33
SNIP1-202ENST00000468040 PLCE1Q9P212 2302 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 LOC107986453A0A1B0GWG9 222 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 DHRS7CA6NNS2 312 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 PLPP2O43688 288 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 CD1AP06126 327 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 HSMCR30P0CW71 290 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 CELP19835 753 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 PCMT1P22061 227 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 ACHEP22303 614 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 MAP2K3P46734 347 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 MST1LQ2TV78 715 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 PAMR1Q6UXH9 720 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 Q6ZSR3 168 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 PLPP7Q8NBV4 271 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 SEMA6DQ8NFY4 1073 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 OR56B2PQ8NGI1 322 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 UFD1Q92890 307 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 MGLLQ99685 303 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 PDCD1LG2Q9BQ51 273 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 DYNLRB1Q9NP97 96 aa13.01□□□□□ -0.33
SNIP1-202ENST00000468040 MYEF2Q9P2K5 600 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms