RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 RP1P56715 2156 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 DNAH14Q0VDD8 3507 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 A0A1W2PPC4 97 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 PQLC2LA1A4F0 135 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 ANKUB1A6NFN9 424 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 PMP2P02689 132 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 HIST1H1DP16402 221 aaKnown RBP12.87□□□□□ -0.35
SEC16A-208ENST00000467838 GNALP38405 381 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 EMP2P54851 167 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 SUMO3P55854 103 aaPredicted RBP12.87□□□□□ -0.35
SEC16A-208ENST00000467838 HSF1Q00613 529 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 SGCAQ16586 387 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 PTCRAQ6ISU1 281 aaPredicted RBP12.87□□□□□ -0.35
SEC16A-208ENST00000467838 H3F3CQ6NXT2 135 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 TMEM88Q6PEY1 159 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 TMPRSS9Q7Z410 1059 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 RTN4RL2Q86UN3 420 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 LHFPL1Q86WI0 220 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 CBLN2Q8IUK8 224 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 ADAMTS17Q8TE56 1095 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 C11orf40Q8WZ69 217 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 ZNF775Q96BV0 537 aaPredicted RBP12.87□□□□□ -0.35
SEC16A-208ENST00000467838 SMIM8Q96KF7 97 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 NICN1Q9BSH3 213 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 FOXQ1Q9C009 403 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 TLNRD1Q9H1K6 362 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 CHST11Q9NPF2 352 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 DNAJB11Q9UBS4 358 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 CTSFQ9UBX1 484 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 SRPK3Q9UPE1 567 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 FLVCR1Q9Y5Y0 555 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 A0A1W2PNV4 684 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 F8W036 122 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 FOSL2P15408 326 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 RAB13P51153 203 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 BLOC1S1P78537 153 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 SRSF3P84103 164 aaKnown RBP12.87□□□□□ -0.35
SEC16A-208ENST00000467838 FOXK1P85037 733 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 IL15RAQ13261 267 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 PLAC9Q5JTB6 97 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 KLHL24Q6TFL4 600 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 OR5AS1Q8N127 324 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 OR13C9Q8NGT0 318 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 TMED6Q8WW62 240 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 HLA-CQ95604 372 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 OCSTAMPQ9BR26 566 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 CENPMQ9NSP4 180 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 UQCC1Q9NVA1 299 aa12.87□□□□□ -0.35
SEC16A-208ENST00000467838 ADAMTS9Q9P2N4 1935 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 PCDH15Q96QU1 1955 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 C13orf42A0A1B0GVH6 325 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 MSGN1A6NI15 193 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 ETV2O00321 342 aaPredicted RBP12.86□□□□□ -0.35
SEC16A-208ENST00000467838 MFNGO00587 321 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 KCNAB3O43448 404 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 HOXB1P14653 301 aaPredicted RBP12.86□□□□□ -0.35
SEC16A-208ENST00000467838 NME1P15531 152 aaKnown RBP12.86□□□□□ -0.35
SEC16A-208ENST00000467838 ABOP16442 354 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 ZNF93P35789 620 aaPredicted RBP12.86□□□□□ -0.35
SEC16A-208ENST00000467838 AKR1C2P52895 323 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 SUPT4H1P63272 117 aaKnown RBP12.86□□□□□ -0.35
SEC16A-208ENST00000467838 POU3F1Q03052 451 aaPredicted RBP12.86□□□□□ -0.35
SEC16A-208ENST00000467838 AKR1C1Q04828 323 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 SMAD2Q15796 467 aaKnown RBP12.86□□□□□ -0.35
SEC16A-208ENST00000467838 CLEC18BQ6UXF7 455 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 ANGPTL5Q86XS5 388 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 KDM8Q8N371 416 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 OR2I1PQ8NGU4 316 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 RHBDD1Q8TEB9 315 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.86□□□□□ -0.35
SEC16A-208ENST00000467838 ZFP57Q9NU63 452 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 COA4Q9NYJ1 87 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 CYP8B1Q9UNU6 501 aa12.86□□□□□ -0.35
SEC16A-208ENST00000467838 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 CCL1P22362 96 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 APOBEC1P41238 236 aaKnown RBP12.85□□□□□ -0.35
SEC16A-208ENST00000467838 CBX5P45973 191 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 B2MP61769 119 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 EIF3IQ13347 325 aaKnown RBP12.85□□□□□ -0.35
SEC16A-208ENST00000467838 FAM189A2Q15884 450 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 GKN2Q86XP6 184 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 POC1AQ8NBT0 407 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 KCNG3Q8TAE7 436 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 SSC4DQ8WTU2 575 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 ARL5BQ96KC2 179 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 SCGB3A2Q96PL1 93 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 NRIP2Q9BQI9 281 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 ADAT1Q9BUB4 502 aaKnown RBP12.85□□□□□ -0.35
SEC16A-208ENST00000467838 SLC5A7Q9GZV3 580 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 RCC2Q9P258 522 aaKnown RBP12.85□□□□□ -0.35
SEC16A-208ENST00000467838 CDC14BO60729 498 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 RPS2P15880 293 aaKnown RBP12.85□□□□□ -0.35
SEC16A-208ENST00000467838 FBLP22087 321 aaKnown RBP12.85□□□□□ -0.35
SEC16A-208ENST00000467838 PAX6P26367 422 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 NPBWR1P48145 328 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 CAV2P51636 162 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 NSDHLQ15738 373 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 SKA3Q8IX90 412 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 CARFQ8N187 725 aa12.85□□□□□ -0.35
SEC16A-208ENST00000467838 OR10H5Q8NGA6 315 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms