RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 GSK3AP49840 483 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 FBXW4P57775 412 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 HSF1Q00613 529 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 SNTB1Q13884 538 aaKnown RBP13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 ATXN7L3Q14CW9 347 aaPredicted RBP13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 OR7A5Q15622 319 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 INPP5JQ15735 1006 aaPredicted RBP13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 ADAD2Q8NCV1 583 aaKnown RBP13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 OR1M1Q8NGA1 313 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 OR5L2Q8NGL0 311 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 WDR54Q9H977 334 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 CENPMQ9NSP4 180 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 NXT1Q9UKK6 140 aaKnown RBP13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 KCNK7Q9Y2U2 307 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 ANKUB1A6NFN9 424 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 SSX5O60225 188 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 DUS4LO95620 317 aaKnown RBP13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 ERCC1P07992 297 aaPredicted RBP13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 GNB3P16520 340 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 TBPP20226 339 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 PRKXP51817 358 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 ZFP36L1Q07352 338 aaKnown RBP13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 MRPL14Q6P1L8 145 aaKnown RBP13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 RHOUQ7L0Q8 258 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 ESX1Q8N693 406 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 CHST4Q8NCG5 386 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 ST8SIA1Q92185 356 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 PIGMQ9H3S5 423 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 IFT46Q9NQC8 304 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 MED29Q9NX70 200 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 SPEGQ15772 3267 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 ZDBF2Q9HCK1 2354 aa13.06□□□□□ -0.32
PRPF38B-204ENST00000467302 TMEM14DPA8MWL7 114 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 ZNF354AO60765 605 aaPredicted RBP13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 SCGNO76038 276 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 ZFAND5O76080 213 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 ZNF883P0CG24 379 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 GNALP38405 381 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 CLDN6P56747 220 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 POU3F1Q03052 451 aaPredicted RBP13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 ZNF169Q14929 603 aaPredicted RBP13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 UQCC3Q6UW78 93 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 OR10S1Q8NGN2 331 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 THAP6Q8TBB0 222 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 C11orf40Q8WZ69 217 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 SLAMF6Q96DU3 332 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 PBOV1Q9GZY1 135 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 AKIRIN1Q9H9L7 192 aaPredicted RBP13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 CHST11Q9NPF2 352 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 KLHL13Q9P2N7 655 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 MBD2Q9UBB5 411 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 SLC5A6Q9Y289 635 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 FAM74A7A6NL05 159 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 FAM25EA8MYX2 175 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 SYT7O43581 403 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 GDF9O60383 454 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 IL32P24001 234 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 APOBEC1P41238 236 aaKnown RBP13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 GPR85P60893 370 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 DEFA5Q01523 94 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 MC2RQ01718 297 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 C17orf67Q0P5P2 114 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 LPAL2Q16609 132 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 FAM74A3Q4VXF1 159 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 RTN4RL2Q86UN3 420 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 CLRN3Q8NCR9 226 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 TMEM185AQ8NFB2 350 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 OR5D14Q8NGL3 314 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 OR10R2Q8NGX6 335 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 SELENOIQ9C0D9 397 aa13.05□□□□□ -0.32
PRPF38B-204ENST00000467302 TRBV6-7A0A0A0MS04 114 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 C2orf72A6NCS6 295 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 F5H0A9 414 aaPredicted RBP13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 ABCD4O14678 606 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 CRHP06850 196 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 SP9P0CG40 484 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 MPLP40238 635 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 TLE3Q04726 772 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 PABPC1L2AQ5JQF8 200 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 HOGA1Q86XE5 327 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 INO80EQ8NBZ0 244 aaPredicted RBP13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 OR5AP2Q8NGF4 316 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 STOML3Q8TAV4 291 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 CASTOR1Q8WTX7 329 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 MARC2Q969Z3 335 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 ARPC5LQ9BPX5 153 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 FANCFQ9NPI8 374 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 ANAPC10Q9UM13 185 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 PCDHB10Q9UN67 800 aa13.04□□□□□ -0.32
PRPF38B-204ENST00000467302 RAB19A4D1S5 217 aa13.03□□□□□ -0.32
PRPF38B-204ENST00000467302 F8VVB4 439 aa13.03□□□□□ -0.32
PRPF38B-204ENST00000467302 F8VWA3 439 aa13.03□□□□□ -0.32
PRPF38B-204ENST00000467302 FGF16O43320 207 aa13.03□□□□□ -0.32
PRPF38B-204ENST00000467302 ZNF208O43345 1280 aa13.03□□□□□ -0.32
PRPF38B-204ENST00000467302 KLK3P07288 261 aaPredicted RBP13.03□□□□□ -0.32
PRPF38B-204ENST00000467302 AKR1C4P17516 323 aa13.03□□□□□ -0.32
PRPF38B-204ENST00000467302 RAB3AP20336 220 aa13.03□□□□□ -0.32
PRPF38B-204ENST00000467302 VAMP1P23763 118 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms