RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 ACKR4Q9NPB9 350 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 PLEK2Q9NYT0 353 aa16.02■□□□□ 0.16
COL9A3-205ENST00000466192 MYO7BQ6PIF6 2116 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 NAP1L6A6NFF2 107 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 H7C417 338 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 FCER2P06734 321 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 B4GALT1P15291 398 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 PSMB1P20618 241 aaKnown RBP16.02■□□□□ 0.15
COL9A3-205ENST00000466192 OTX1P32242 354 aaPredicted RBP16.02■□□□□ 0.15
COL9A3-205ENST00000466192 GSG1Q2KHT4 349 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 CEACAM16Q2WEN9 425 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 ZNF627Q7L945 461 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 FAM109AQ8N4B1 249 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 BEST4Q8NFU0 473 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 OR56B4Q8NH76 319 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 FNDC9Q8TBE3 224 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 GIMAP1Q8WWP7 306 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 DACT3Q96B18 629 aaPredicted RBP16.02■□□□□ 0.15
COL9A3-205ENST00000466192 DEFB127Q9H1M4 99 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 GPR35Q9HC97 309 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 MTFP1Q9UDX5 166 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 NOSIPQ9Y314 301 aaKnown RBP16.02■□□□□ 0.15
COL9A3-205ENST00000466192 RHBDD3Q9Y3P4 386 aa16.02■□□□□ 0.15
COL9A3-205ENST00000466192 AKAP13Q12802 2813 aa16.01■□□□□ 0.15
COL9A3-205ENST00000466192 DBHP09172 617 aa16.01■□□□□ 0.15
COL9A3-205ENST00000466192 RAB3AP20336 220 aa16.01■□□□□ 0.15
COL9A3-205ENST00000466192 CCL1P22362 96 aa16.01■□□□□ 0.15
COL9A3-205ENST00000466192 ZNF529Q6P280 563 aa16.01■□□□□ 0.15
COL9A3-205ENST00000466192 RNF170Q96K19 258 aa16.01■□□□□ 0.15
COL9A3-205ENST00000466192 FOXB1Q99853 325 aa16.01■□□□□ 0.15
COL9A3-205ENST00000466192 ARHGAP21Q5T5U3 1957 aa16.01■□□□□ 0.15
COL9A3-205ENST00000466192 LDLRAD4O15165 306 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 SYNGR4O95473 234 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 IGHV3-9P01782 118 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 CST2P09228 141 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 GABRA1P14867 456 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 PRSS3P35030 304 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 SLC6A9P48067 706 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 FCN2Q15485 313 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 TSPO2Q5TGU0 170 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 OLFML2AQ68BL7 652 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 TMEM178AQ8NBL3 297 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 PGAM5Q96HS1 289 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 SPACA5Q96QH8 159 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 COL25A1Q9BXS0 654 aaPredicted RBP16■□□□□ 0.15
COL9A3-205ENST00000466192 ACTR6Q9GZN1 396 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 OR10A4Q9H209 315 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 OR51J1Q9H342 316 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 PAQR5Q9NXK6 330 aaPredicted RBP16■□□□□ 0.15
COL9A3-205ENST00000466192 BOLA1Q9Y3E2 137 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 MRPL33O75394 65 aaKnown RBP16■□□□□ 0.15
COL9A3-205ENST00000466192 STOMP27105 288 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 HOXD11P31277 338 aaPredicted RBP16■□□□□ 0.15
COL9A3-205ENST00000466192 RAG2P55895 527 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 TUSC5Q8IXB3 177 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 SLC22A24Q8N4F4 322 aa16■□□□□ 0.15
COL9A3-205ENST00000466192 ZMAT3Q9HA38 289 aaKnown RBP16■□□□□ 0.15
COL9A3-205ENST00000466192 MCTS1Q9ULC4 181 aaKnown RBP16■□□□□ 0.15
COL9A3-205ENST00000466192 TNRC6AQ8NDV7 1962 aaKnown RBP15.99■□□□□ 0.15
COL9A3-205ENST00000466192 SMLR1H3BR10 107 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 ACTL6AO96019 429 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 IGLV3-1P01715 115 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 YES1P07947 543 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 PATE4P0C8F1 98 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 VEGFCP49767 419 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 GNG2P59768 71 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 CLN3Q13286 438 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 MAB21L1Q13394 359 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 LINC00303Q3SY05 128 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 MOGAT2Q3SYC2 334 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 LYZL4Q96KX0 146 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 SLCO5A1Q9H2Y9 848 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 METTL17Q9H7H0 456 aaPredicted RBP15.99■□□□□ 0.15
COL9A3-205ENST00000466192 M0R135 149 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 SGCEO43556 437 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 PEX14O75381 377 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 PMP22Q01453 160 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 PMPCAQ10713 525 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 RAB35Q15286 201 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 ST3GAL2Q16842 350 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 ZNF774Q6NX45 483 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 DOK3Q7L591 496 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 RNF144BQ7Z419 303 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 FAM46BQ96A09 425 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 ZNF799Q96GE5 643 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 MED30Q96HR3 178 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 SLA2Q9H6Q3 261 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 LDAHQ9H6V9 325 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 CALHM2Q9HA72 323 aa15.99■□□□□ 0.15
COL9A3-205ENST00000466192 SYNGR3O43761 229 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 ZNF32P17041 273 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 CRYGSP22914 178 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 ZNF93P35789 620 aaPredicted RBP15.98■□□□□ 0.15
COL9A3-205ENST00000466192 RSPO4Q2I0M5 234 aaPredicted RBP15.98■□□□□ 0.15
COL9A3-205ENST00000466192 ACBD4Q8NC06 268 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 OR11H7Q8NGC8 314 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 OR4D10Q8NGI6 311 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 OR14K1Q8NGZ2 314 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 FGFBP3Q8TAT2 258 aa15.98■□□□□ 0.15
COL9A3-205ENST00000466192 MS4A3Q96HJ5 214 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms