RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 TMEM244Q5VVB8 128 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 LRFN4Q6PJG9 635 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 DCDC5Q6ZRR9 648 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 FCRLAQ7L513 359 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 AAED1Q7RTV5 226 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 LYSMD2Q8IV50 215 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 WDFY1Q8IWB7 410 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 GCNT2Q8N0V5 402 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 PRSS35Q8N3Z0 413 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 ZIC4Q8N9L1 334 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 TSEN15Q8WW01 171 aaKnown RBP12.06□□□□□ -0.48
HDAC6-215ENST00000465457 ZNF385AQ96PM9 386 aaKnown RBP12.06□□□□□ -0.48
HDAC6-215ENST00000465457 SRRQ9GZT4 340 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 SP140LQ9H930 580 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 RNF122Q9H9V4 155 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 PARPBPQ9NWS1 579 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 GDF2Q9UK05 429 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-215ENST00000465457 HHLA2Q9UM44 414 aa12.06□□□□□ -0.48
HDAC6-215ENST00000465457 IGHV3-15A0A0B4J1V0 119 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 TMEM269A0A1B0GVZ9 245 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 RNF223E7ERA6 249 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 HAX1O00165 279 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 AIPO00170 330 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 TBX1O43435 398 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 NCR1O76036 304 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 OCMP0CE72 109 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-215ENST00000465457 FSTP19883 344 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 HSD11B1P28845 292 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 EVX1P49640 407 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 CAV3P56539 151 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 CLDN18P56856 261 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 OXA1LQ15070 435 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 RNPS1Q15287 305 aaKnown RBP12.05□□□□□ -0.48
HDAC6-215ENST00000465457 NRN1LQ496H8 165 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 LINC00346Q8IVM7 164 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 CENPSQ8N2Z9 138 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 GPR137CQ8N3F9 429 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 GJC3Q8NFK1 279 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 IL17RDQ8NFM7 739 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 ABTB1Q969K4 478 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-215ENST00000465457 WDYHV1Q96HA8 205 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 WFIKKN1Q96NZ8 548 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 ABCB10Q9NRK6 738 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 OR52A1Q9UKL2 312 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 GTF2A1LQ9UNN4 478 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 DHDHQ9UQ10 334 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 LHFPL6Q9Y693 200 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 V9GY05 133 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 SVEP1Q4LDE5 3571 aa12.05□□□□□ -0.48
HDAC6-215ENST00000465457 SMIM30A4D0T7 59 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 FAM25AB3EWG3 89 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 FAM25CB3EWG5 89 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 FAM25GB3EWG6 89 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 PIN1P1O15428 100 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 HPGDSO60760 199 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 IL18BPO95998 194 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 APOA1P02647 267 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 CALCBP10092 127 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 THBS2P35442 1172 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 NR4A2P43354 598 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 STARP49675 285 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 CAPZA1P52907 286 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 FAM27E3Q08E93 113 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 TAF13Q15543 124 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 CNIH2Q6PI25 160 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 C22orf34Q6ZV56 151 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 CHMP1BQ7LBR1 199 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 NR2C2APQ86WQ0 139 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 CCDC54Q8NEL0 328 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 TRMT10AQ8TBZ6 339 aaKnown RBP12.04□□□□□ -0.48
HDAC6-215ENST00000465457 TMEM106AQ96A25 262 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 LINC00470Q9BZP3 86 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 GP6Q9HCN6 339 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 CYSLTR2Q9NS75 346 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 CENPMQ9NSP4 180 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 DDX28Q9NUL7 540 aaKnown RBP12.04□□□□□ -0.48
HDAC6-215ENST00000465457 ASH2LQ9UBL3 628 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 NUFIP1Q9UHK0 495 aaKnown RBP12.04□□□□□ -0.48
HDAC6-215ENST00000465457 SPATA2Q9UM82 520 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 FOXJ3Q9UPW0 622 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 EMC9Q9Y3B6 208 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 ETV7Q9Y603 341 aa12.04□□□□□ -0.48
HDAC6-215ENST00000465457 MEGF11A6BM72 1044 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 ANXA2P2A6NMY6 339 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 IFITM5A6NNB3 132 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 ZNF724A8MTY0 619 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 TPPPO94811 219 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 PNPP00491 289 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 ANXA2P07355 339 aaKnown RBP12.03□□□□□ -0.48
HDAC6-215ENST00000465457 FCGR2AP12318 317 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 SELENOPP49908 381 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 PCBD1P61457 104 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 IFITM3Q01628 133 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 SCN1BQ07699 218 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 MFGE8Q08431 387 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-215ENST00000465457 ECH1Q13011 328 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 ZNF79Q15937 498 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 SGCAQ16586 387 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 CEP78Q5JTW2 689 aa12.03□□□□□ -0.48
HDAC6-215ENST00000465457 FAM27BQ5VT28 67 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms