RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ST7LQ8TDW4 575 aa14.72□□□□□ -0.05
EXOSC3-203ENST00000465229 USB1Q9BQ65 265 aaKnown RBP14.72□□□□□ -0.05
EXOSC3-203ENST00000465229 NEURL2Q9BR09 285 aa14.72□□□□□ -0.05
EXOSC3-203ENST00000465229 WACQ9BTA9 647 aa14.72□□□□□ -0.05
EXOSC3-203ENST00000465229 ABHD6Q9BV23 337 aa14.72□□□□□ -0.05
EXOSC3-203ENST00000465229 OBP2BQ9NPH6 170 aa14.72□□□□□ -0.05
EXOSC3-203ENST00000465229 RABL2AQ9UBK7 228 aaPredicted RBP14.72□□□□□ -0.05
EXOSC3-203ENST00000465229 RABL2BQ9UNT1 228 aa14.72□□□□□ -0.05
EXOSC3-203ENST00000465229 SLC25A15Q9Y619 301 aa14.72□□□□□ -0.05
EXOSC3-203ENST00000465229 TRBV5-7A0A0A0MS05 114 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 FAM25AB3EWG3 89 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 FAM25CB3EWG5 89 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 FAM25GB3EWG6 89 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 UBL3O95164 117 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 HOXC12P31275 282 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 RIDAP52758 137 aaKnown RBP14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 IL18Q14116 193 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 EIF2B1Q14232 305 aaKnown RBP14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 KRT77Q7Z794 578 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 MDP1Q86V88 176 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 CADM3Q8N126 398 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 PRSS35Q8N3Z0 413 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 Q8N402 240 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 ZNF676Q8N7Q3 588 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 SAMD12Q8N8I0 201 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 NANOS1Q8WY41 292 aaKnown RBP14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 OR2H1Q9GZK4 316 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 SLITRK2Q9H156 845 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 C1orf198Q9H425 327 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 RNF121Q9H920 327 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 NPDC1Q9NQX5 325 aaPredicted RBP14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 EXTL2Q9UBQ6 330 aa14.71□□□□□ -0.05
EXOSC3-203ENST00000465229 FASNP49327 2511 aaKnown RBP14.71□□□□□ -0.06
EXOSC3-203ENST00000465229 TENM4Q6N022 2769 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 A0A1W2PPK0 400 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 CLEC18AA5D8T8 446 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 HNRNPCP07910 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 SLC2A2P11168 524 aaPredicted RBP14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 ATF1P18846 271 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 ARR3P36575 388 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 SCRN3Q0VDG4 424 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 SNTB1Q13884 538 aaKnown RBP14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 GSG1Q2KHT4 349 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 CCDC92Q53HC0 331 aaPredicted RBP14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 PABPC1L2AQ5JQF8 200 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 CLEC18BQ6UXF7 455 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 LRRN1Q6UXK5 716 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 DRAXINQ8NBI3 349 aaPredicted RBP14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 CLEC18CQ8NCF0 446 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 OR10S1Q8NGN2 331 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 AKR7LQ8NHP1 331 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 ZNF75AQ96N20 296 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 WNT5BQ9H1J7 359 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 PNRC2Q9NPJ4 139 aaKnown RBP14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 SPATA2Q9UM82 520 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 AMDHD2Q9Y303 409 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 ACOD1A6NK06 481 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 AIPO00170 330 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 WNT11O96014 354 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 SPNP16150 400 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 NR4A2P43354 598 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 KIR3DL2P43630 455 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 SORDQ00796 357 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 P2RY14Q15391 338 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 ZNF774Q6NX45 483 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 TMEM53Q6P2H8 277 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 BAIAP2L2Q6UXY1 529 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 CPEB3Q8NE35 698 aaKnown RBP14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 SSC4DQ8WTU2 575 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 MUCL1Q96DR8 90 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 WFIKKN1Q96NZ8 548 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 C1QTNF6Q9BXI9 259 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 SLC22A4Q9H015 551 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 PLEK2Q9NYT0 353 aa14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 AK6Q9Y3D8 172 aaKnown RBP14.7□□□□□ -0.06
EXOSC3-203ENST00000465229 IFITM5A6NNB3 132 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 SGCEO43556 437 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 EIF4EP06730 217 aaKnown RBP14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 THBDP07204 575 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 CBR1P16152 277 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 PPP3CBP16298 524 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 DCTDP32321 178 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 RFX2P48378 723 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 PITPNBP48739 271 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 PPA1Q15181 289 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 WDR38Q5JTN6 314 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 C1QTNF12Q5T7M4 302 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 HACD4Q5VWC8 232 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 TRIQKQ629K1 86 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 PYHIN1Q6K0P9 492 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 SPATC1Q76KD6 591 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 CATSPERDQ86XM0 798 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 ZNF584Q8IVC4 421 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 CHAC2Q8WUX2 184 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 RNF133Q8WVZ7 376 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 SLAMF6Q96DU3 332 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 TCF7L1Q9HCS4 588 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 LRP12Q9Y561 859 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 V9GY05 133 aa14.69□□□□□ -0.06
EXOSC3-203ENST00000465229 SYNGR3O43761 229 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms