RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 DCTN5Q9BTE1 182 aa6.24□□□□□ -1.41
SMC3-202ENST00000462899 POLR2J2Q9GZM3 115 aaKnown RBP6.24□□□□□ -1.41
SMC3-202ENST00000462899 POLR2J3Q9H1A7 115 aaKnown RBP6.24□□□□□ -1.41
SMC3-202ENST00000462899 FN3KRPQ9HA64 309 aa6.24□□□□□ -1.41
SMC3-202ENST00000462899 RAB18Q9NP72 206 aa6.24□□□□□ -1.41
SMC3-202ENST00000462899 THAP1Q9NVV9 213 aa6.24□□□□□ -1.41
SMC3-202ENST00000462899 ONECUT1Q9UBC0 465 aa6.24□□□□□ -1.41
SMC3-202ENST00000462899 PRPF19Q9UMS4 504 aaKnown RBP6.24□□□□□ -1.41
SMC3-202ENST00000462899 LHFPL6Q9Y693 200 aa6.24□□□□□ -1.41
SMC3-202ENST00000462899 TRAV27A0A087WT01 109 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 A0A1W2PRD5 423 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 A0A1W2PRF3 423 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 A0A1W2PRM7 423 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 M0R1W7 72 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 IMPA2O14732 288 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 AHCYL1O43865 530 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 HTR3BO95264 441 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 PAHP00439 452 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 ACSM4P0C7M7 580 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 KITP10721 976 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 EEF1B2P24534 225 aaKnown RBP6.23□□□□□ -1.41
SMC3-202ENST00000462899 TGM4P49221 684 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 GZMMP51124 257 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 GP2P55259 537 aaKnown RBP6.23□□□□□ -1.41
SMC3-202ENST00000462899 CD83Q01151 205 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 PIN1Q13526 163 aaPredicted RBP6.23□□□□□ -1.41
SMC3-202ENST00000462899 LY6EQ16553 131 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 WDR38Q5JTN6 314 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 CASC10Q5T4H9 136 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 ZNF826PQ6ZT77 177 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 CCDC80Q76M96 950 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 PATL1Q86TB9 770 aaKnown RBP6.23□□□□□ -1.41
SMC3-202ENST00000462899 WDR86Q86TI4 376 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 MRPL41Q8IXM3 137 aaKnown RBP6.23□□□□□ -1.41
SMC3-202ENST00000462899 FAM216BQ8N7L0 139 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 ACOT11Q8WXI4 607 aaPredicted RBP6.23□□□□□ -1.41
SMC3-202ENST00000462899 SPDL1Q96EA4 605 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 RCC1LQ96I51 464 aaKnown RBP6.23□□□□□ -1.41
SMC3-202ENST00000462899 CLPTM1LQ96KA5 538 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 ADAT1Q9BUB4 502 aaKnown RBP6.23□□□□□ -1.41
SMC3-202ENST00000462899 NPFFR1Q9GZQ6 430 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 HDHD2Q9H0R4 259 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 PNRC2Q9NPJ4 139 aaKnown RBP6.23□□□□□ -1.41
SMC3-202ENST00000462899 VSX1Q9NZR4 365 aaPredicted RBP6.23□□□□□ -1.41
SMC3-202ENST00000462899 RIMS3Q9UJD0 308 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 MED31Q9Y3C7 131 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 ADAM18Q9Y3Q7 739 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 U3KQK5 164 aa6.23□□□□□ -1.41
SMC3-202ENST00000462899 RYR1P21817 5038 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 IGHV3OR15-7A0A075B7D8 119 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 PRSS37A4D1T9 235 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 HTR3EA5X5Y0 456 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 NKX6-3A6NJ46 265 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 VGLL3A8MV65 326 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 EVPLLA8MZ36 301 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 GMDSO60547 372 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 DUS4LO95620 317 aaKnown RBP6.22□□□□□ -1.41
SMC3-202ENST00000462899 SELLP14151 372 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 MUC1P15941 1255 aaPredicted RBP6.22□□□□□ -1.41
SMC3-202ENST00000462899 TNFRSF1BP20333 461 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 CA6P23280 308 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 PAX6P26367 422 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 SLC35A2P78381 396 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 OR8G1Q15617 311 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 PCK2Q16822 640 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 ANKDD1AQ495B1 522 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 DEFB121Q5J5C9 76 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 TCTEX1D4Q5JR98 221 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 ATPAF1Q5TC12 328 aaPredicted RBP6.22□□□□□ -1.41
SMC3-202ENST00000462899 NCR3LG1Q68D85 454 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 STUMQ69YW2 141 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 NAA40Q86UY6 237 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 CMTM4Q8IZR5 234 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 AENQ8WTP8 325 aaKnown RBP6.22□□□□□ -1.41
SMC3-202ENST00000462899 BPIFA2Q96DR5 249 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 Q96M85 177 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 DDOQ99489 341 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 CCL13Q99616 98 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 HCAR1Q9BXC0 346 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 SLC22A4Q9H015 551 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 KAT8Q9H7Z6 458 aaKnown RBP6.22□□□□□ -1.41
SMC3-202ENST00000462899 C1orf123Q9NWV4 160 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 DNAJB11Q9UBS4 358 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 COA3Q9Y2R0 106 aaPredicted RBP6.22□□□□□ -1.41
SMC3-202ENST00000462899 NDUFAF1Q9Y375 327 aa6.22□□□□□ -1.41
SMC3-202ENST00000462899 LCE6AA0A183 80 aa6.21□□□□□ -1.42
SMC3-202ENST00000462899 CD300LBA8K4G0 201 aa6.21□□□□□ -1.42
SMC3-202ENST00000462899 E9PQ18 207 aa6.21□□□□□ -1.42
SMC3-202ENST00000462899 DCTN6O00399 190 aa6.21□□□□□ -1.42
SMC3-202ENST00000462899 CDC42EP2O14613 210 aa6.21□□□□□ -1.42
SMC3-202ENST00000462899 ACOT8O14734 319 aa6.21□□□□□ -1.42
SMC3-202ENST00000462899 CD14P08571 375 aa6.21□□□□□ -1.42
SMC3-202ENST00000462899 NHLRC4P0CG21 123 aaPredicted RBP6.21□□□□□ -1.42
SMC3-202ENST00000462899 IFI30P13284 250 aa6.21□□□□□ -1.42
SMC3-202ENST00000462899 HOXD3P31249 432 aaPredicted RBP6.21□□□□□ -1.42
SMC3-202ENST00000462899 BMXP51813 675 aa6.21□□□□□ -1.42
SMC3-202ENST00000462899 MTPNP58546 118 aa6.21□□□□□ -1.42
SMC3-202ENST00000462899 TAS2R41P59536 307 aa6.21□□□□□ -1.42
SMC3-202ENST00000462899 IFFO1Q0D2I5 559 aa6.21□□□□□ -1.42
SMC3-202ENST00000462899 EPGNQ6UW88 154 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms