RNA–Protein interactions for RNA: ENST00000461983.5

C1S-209, Transcript of complement C1s, human

TSL 2

Gene C1S, Length 950 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1S-209	ENST00000461983	GOSR1	O95249	250 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	IL1A	P01583	271 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	CD40	P25942	277 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	CCKAR	P32238	428 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	SOX6	P35712	828 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	PPP3R1	P63098	170 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	ESPL1	Q14674	2120 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	ODF4	Q2M2E3	257 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	ZNF718	Q3SXZ3	478 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	C22orf42	Q6IC83	251 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	FBXW12	Q6X9E4	464 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	TMEM91	Q6ZNR0	172 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	NAA40	Q86UY6	237 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	WFDC8	Q8IUA0	241 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	PARP16	Q8N5Y8	322 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	TMEM106A	Q96A25	262 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	C12orf43	Q96C57	262 aa	Known RBP	13.38	□□□□□ -0.27
C1S-209	ENST00000461983	CPNE2	Q96FN4	548 aa	Predicted RBP	13.38	□□□□□ -0.27
C1S-209	ENST00000461983	WFIKKN1	Q96NZ8	548 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	DERL3	Q96Q80	235 aa		13.38	□□□□□ -0.27
C1S-209	ENST00000461983	REPIN1	Q9BWE0	567 aa	Known RBP	13.38	□□□□□ -0.27
C1S-209	ENST00000461983	TRBV5-7	A0A0A0MS05	114 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983		A0A1B0GTI1	187 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	MAGEB3	O15480	346 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	SMPD2	O60906	423 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	ALX3	O95076	343 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	RAC2	P15153	192 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	SRM	P19623	302 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	NR4A1	P22736	598 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	CALR	P27797	417 aa	Known RBP	13.37	□□□□□ -0.27
C1S-209	ENST00000461983	GCH1	P30793	250 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	THBS4	P35443	961 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	PPP1CB	P62140	327 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	GFOD2	Q3B7J2	385 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	SNAI3	Q3KNW1	292 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	BEX5	Q5H9J7	111 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	GLYATL3	Q5SZD4	288 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	ALKBH2	Q6NS38	261 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	RDH10	Q8IZV5	341 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	OR1J1	Q8NGS3	322 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	FAM222B	Q8WU58	562 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.37	□□□□□ -0.27
C1S-209	ENST00000461983	OR14A2	Q96R54	314 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	GPR160	Q9UJ42	338 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	STARD10	Q9Y365	291 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.37	□□□□□ -0.27
C1S-209	ENST00000461983		V9GYS6	101 aa		13.37	□□□□□ -0.27
C1S-209	ENST00000461983	CFAP46	Q8IYW2	2715 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	GGT3P	A6NGU5	568 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	CELA3B	P08861	270 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	OCM	P0CE72	109 aa	Predicted RBP	13.36	□□□□□ -0.27
C1S-209	ENST00000461983	CCL2	P13500	99 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	FST	P19883	344 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	GLRX	P35754	106 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	WNT5A	P41221	380 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	SERPINB10	P48595	397 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	GSK3A	P49840	483 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	TFF3	Q07654	80 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	OR8B8	Q15620	311 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	CDH26	Q8IXH8	852 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	NUP37	Q8NFH4	326 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	PPP1R14A	Q96A00	147 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.36	□□□□□ -0.27
C1S-209	ENST00000461983	CENPO	Q9BU64	300 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	SLC22A4	Q9H015	551 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	NOX4	Q9NPH5	578 aa		13.36	□□□□□ -0.27
C1S-209	ENST00000461983	SPEN	Q96T58	3664 aa	Known RBP	13.35	□□□□□ -0.27
C1S-209	ENST00000461983	NCOA6	Q14686	2063 aa	Predicted RBP	13.35	□□□□□ -0.27
C1S-209	ENST00000461983	WIPF3	A6NGB9	483 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	ANKRD30BL	A7E2S9	258 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	THBD	P07204	575 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	CD3E	P07766	207 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	RAB3A	P20336	220 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	KIR2DL3	P43628	341 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	SOX2	P48431	317 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	CAPZA1	P52907	286 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	VBP1	P61758	197 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	LSM3	P62310	102 aa	Known RBP	13.35	□□□□□ -0.27
C1S-209	ENST00000461983	FAM3A	P98173	230 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	ZNF92	Q03936	586 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	HGFAC	Q04756	655 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	GK2	Q14410	553 aa	Predicted RBP	13.35	□□□□□ -0.27
C1S-209	ENST00000461983	UTS2B	Q765I0	119 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	KRT74	Q7RTS7	529 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	NKAIN3	Q8N8D7	197 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	OR14K1	Q8NGZ2	314 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	RGP1	Q92546	391 aa	Predicted RBP	13.35	□□□□□ -0.27
C1S-209	ENST00000461983	AP3S1	Q92572	193 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	RPL3L	Q92901	407 aa	Known RBP	13.35	□□□□□ -0.27
C1S-209	ENST00000461983	PIGT	Q969N2	578 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	FGGY	Q96C11	551 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	HAVCR1	Q96D42	359 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.35	□□□□□ -0.27
C1S-209	ENST00000461983	MRI1	Q9BV20	369 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	DCSTAMP	Q9H295	470 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	ZCCHC4	Q9H5U6	513 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	ZNF319	Q9P2F9	582 aa		13.35	□□□□□ -0.27
C1S-209	ENST00000461983	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.35	□□□□□ -0.27
C1S-209	ENST00000461983	FBXO9	Q9UK97	447 aa	Predicted RBP	13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms