RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 MFSD8Q8NHS3 518 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 ST8SIA2Q92186 375 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 NKD1Q969G9 470 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 DDIT4LQ96D03 193 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 PHYHIPLQ96FC7 376 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 NUDT16L1Q9BRJ7 211 aaKnown RBP11.02□□□□□ -0.64
COL4A6-204ENST00000461897 FAM117AQ9C073 453 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 TINAGL1Q9GZM7 467 aaPredicted RBP11.02□□□□□ -0.64
COL4A6-204ENST00000461897 PTGES2Q9H7Z7 377 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 COQ3Q9NZJ6 369 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 TNFSF18Q9UNG2 199 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 PLEKHA6Q9Y2H5 1048 aa11.02□□□□□ -0.64
COL4A6-204ENST00000461897 PTPRBP23467 1997 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 LOC107986453A0A1B0GWG9 222 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 POM121CA8CG34 1229 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 H3BSH0 61 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 RLN2P04090 185 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 OR7A5Q15622 319 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 ETFDHQ16134 617 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 TMEM244Q5VVB8 128 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 JMJD6Q6NYC1 403 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-204ENST00000461897 C3orf33Q6P1S2 294 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 FAHD2BQ6P2I3 314 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-204ENST00000461897 FAM122CQ6P4D5 195 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 ZNF546Q86UE3 836 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 SLC25A42Q86VD7 318 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 BEST3Q8N1M1 668 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 ZDHHC22Q8N966 263 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 PXT1Q8NFP0 134 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 STEAP2Q8NFT2 490 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 SLC26A10Q8NG04 563 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 ST7LQ8TDW4 575 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 MRPS24Q96EL2 167 aaKnown RBP11.02□□□□□ -0.65
COL4A6-204ENST00000461897 FAHD2AQ96GK7 314 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 PRRT1Q99946 306 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 BARX1Q9HBU1 254 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-204ENST00000461897 RYDENQ9NUL5 291 aaKnown RBP11.02□□□□□ -0.65
COL4A6-204ENST00000461897 FBLN5Q9UBX5 448 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 KLK13Q9UKR3 277 aa11.02□□□□□ -0.65
COL4A6-204ENST00000461897 ALPK2Q86TB3 2170 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 MED12Q93074 2177 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 A0A0G2JMM0 328 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 A0A1W2PPB8 328 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 A0A1W2PRS3 328 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 OR5H14A6NHG9 310 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 LIPT2A6NK58 231 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 KIR3DP1A8MWS1 328 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 CDRT15L2A8MXV6 281 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 DISC1C4P0D8 188 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 LIFP15018 202 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 ZBTB25P24278 435 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 MYBPHQ13203 477 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 BTN1A1Q13410 526 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 ZNF260Q3ZCT1 412 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 DNM1P34Q6PK57 102 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 ZNF627Q7L945 461 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 DTX1Q86Y01 620 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 STPG2Q8N412 459 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 BPIFB2Q8N4F0 458 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 IL22RA1Q8N6P7 574 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 OR51A2Q8NGJ7 313 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 OR1J2Q8NGS2 313 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 THOC3Q96J01 351 aaKnown RBP11.01□□□□□ -0.65
COL4A6-204ENST00000461897 SGCZQ96LD1 299 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 GNRHR2Q96P88 292 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 AIFM2Q9BRQ8 373 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 TMEM185BQ9H7F4 350 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 CGGBP1Q9UFW8 167 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-204ENST00000461897 GPR160Q9UJ42 338 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 OR52A1Q9UKL2 312 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 RAB22AQ9UL26 194 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 PRELID1Q9Y255 219 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 CFAP47Q6ZTR5 3102 aa11.01□□□□□ -0.65
COL4A6-204ENST00000461897 ZFHX2Q9C0A1 2572 aaPredicted RBP11□□□□□ -0.65
COL4A6-204ENST00000461897 MS4A18H0YCH9 400 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 M0QYG6 137 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 RAB27BO00194 218 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 BCL2L11O43521 198 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 SCGNO76038 276 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 HLA-DOBP13765 273 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 ADH6P28332 368 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 HSD11B1P28845 292 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 CD34P28906 385 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 DNASE1L1P49184 302 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 GSK3AP49840 483 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 MMP16P51512 607 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 QRFPP83859 136 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 MS4A18Q3C1V0 323 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 DCAF10Q5QP82 559 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 C11orf87Q6NUJ2 197 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 ZSCAN2Q7Z7L9 614 aaPredicted RBP11□□□□□ -0.65
COL4A6-204ENST00000461897 KDM8Q8N371 416 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 OR13C3Q8NGS6 347 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 ASB10Q8WXI3 467 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 ZBTB8AQ96BR9 441 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 TMEM41AQ96HV5 264 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 SLC6A7Q99884 636 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 GDF2Q9UK05 429 aaPredicted RBP11□□□□□ -0.65
COL4A6-204ENST00000461897 COA3Q9Y2R0 106 aaPredicted RBP11□□□□□ -0.65
COL4A6-204ENST00000461897 EMC9Q9Y3B6 208 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms