RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 SRPXP78539 464 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 BAMBIQ13145 260 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 HMGN3Q15651 99 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 RAB11FIP2Q7L804 512 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 SLC22A18ASQ8N1D0 253 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 SLC38A9Q8NBW4 561 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 OR5M8Q8NGP6 311 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 C2orf50Q96LR7 162 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 ZNF2Q9BSG1 426 aaPredicted RBP10.79□□□□□ -0.68
CPNE6-202ENST00000460657 CNTD2Q9H8S5 307 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 CA10Q9NS85 328 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 EFNB2P52799 333 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 SMAD4Q13485 552 aaKnown RBP10.79□□□□□ -0.68
CPNE6-202ENST00000460657 PLXDC2Q6UX71 529 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 TMPPEQ6ZT21 453 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 LGI3Q8N145 548 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 OR52N4Q8NGI2 321 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 NANOS1Q8WY41 292 aaKnown RBP10.79□□□□□ -0.68
CPNE6-202ENST00000460657 SPACA9Q96E40 222 aaPredicted RBP10.79□□□□□ -0.68
CPNE6-202ENST00000460657 TMPRSS13Q9BYE2 586 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 BCO1Q9HAY6 547 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 ZFP64Q9NPA5 681 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 BOKQ9UMX3 212 aaPredicted RBP10.79□□□□□ -0.68
CPNE6-202ENST00000460657 PCDHGA5Q9Y5G8 931 aa10.79□□□□□ -0.68
CPNE6-202ENST00000460657 ANKRD30BLA7E2S9 258 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 TRAPPC2LH3BP13 241 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 B3GALNT1O75752 331 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 IFNA1P01562 189 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 ZNF709Q8N972 641 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 OR52H1Q8NGJ2 320 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 GPX8Q8TED1 209 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 SEH1LQ96EE3 360 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 PADI1Q9ULC6 663 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 SIT1Q9Y3P8 196 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 A0A0G2JK05 382 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 DCTN6O00399 190 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 UPK3AO75631 287 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 KIR3DL2P43630 455 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 RBP2P50120 134 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 C16orf47Q6ZP98 133 aaPredicted RBP10.78□□□□□ -0.68
CPNE6-202ENST00000460657 OR51A2Q8NGJ7 313 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 ASB10Q8WXI3 467 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 ZNF107Q9UII5 783 aaPredicted RBP10.78□□□□□ -0.68
CPNE6-202ENST00000460657 TCRBV16S1A1N1A0A5B0 115 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 C9orf170A2RU37 121 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 EPHA1P21709 976 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 NXPH1P58417 271 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 HSD17B13Q7Z5P4 300 aaPredicted RBP10.78□□□□□ -0.68
CPNE6-202ENST00000460657 SUMF2Q8NBJ7 301 aa10.78□□□□□ -0.68
CPNE6-202ENST00000460657 ATOH1Q92858 354 aaPredicted RBP10.78□□□□□ -0.68
CPNE6-202ENST00000460657 A0A087WZY1 265 aa10.77□□□□□ -0.68
CPNE6-202ENST00000460657 YKT6O15498 198 aa10.77□□□□□ -0.68
CPNE6-202ENST00000460657 DHHO43323 396 aa10.77□□□□□ -0.68
CPNE6-202ENST00000460657 JTBO76095 146 aa10.77□□□□□ -0.68
CPNE6-202ENST00000460657 CER1O95813 267 aa10.77□□□□□ -0.68
CPNE6-202ENST00000460657 CHATP28329 748 aa10.77□□□□□ -0.68
CPNE6-202ENST00000460657 APLNRP35414 380 aa10.77□□□□□ -0.68
CPNE6-202ENST00000460657 SHBQ15464 509 aa10.77□□□□□ -0.68
CPNE6-202ENST00000460657 ATPAF1Q5TC12 328 aaPredicted RBP10.77□□□□□ -0.68
CPNE6-202ENST00000460657 ZNF813Q6ZN06 617 aa10.77□□□□□ -0.68
CPNE6-202ENST00000460657 BEND4Q6ZU67 534 aa10.77□□□□□ -0.68
CPNE6-202ENST00000460657 OR11H4Q8NGC9 324 aa10.77□□□□□ -0.68
CPNE6-202ENST00000460657 ARL5BQ96KC2 179 aa10.77□□□□□ -0.68
CPNE6-202ENST00000460657 FLVCR1Q9Y5Y0 555 aa10.77□□□□□ -0.68
CPNE6-202ENST00000460657 A6NCN8 305 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 SERPINE3A8MV23 424 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 PHF1O43189 567 aaPredicted RBP10.77□□□□□ -0.69
CPNE6-202ENST00000460657 SSX5O60225 188 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 IGF2P01344 180 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 HIST1H1DP16402 221 aaKnown RBP10.77□□□□□ -0.69
CPNE6-202ENST00000460657 PHLDA2Q53GA4 152 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 LINC01590Q5TEZ4 76 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 PTCRAQ6ISU1 281 aaPredicted RBP10.77□□□□□ -0.69
CPNE6-202ENST00000460657 WDR5BQ86VZ2 330 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 SPEM1Q8N4L4 309 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 CPT1CQ8TCG5 803 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 PP6455Q8WZ26 134 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 KCNIP1Q9NZI2 227 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 BET1O15155 118 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 CNOT4O95628 575 aaKnown RBP10.77□□□□□ -0.69
CPNE6-202ENST00000460657 CSF2RBP32927 897 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 THBS4P35443 961 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 ANKRD37Q7Z713 158 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 LIPHQ8WWY8 451 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 HLA-CQ95604 372 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 TMEM74BQ9NUR3 256 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 DOCK6Q96HP0 2047 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 DUS4LO95620 317 aaKnown RBP10.77□□□□□ -0.69
CPNE6-202ENST00000460657 IFNA17P01571 189 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 RPL23AP62750 156 aaKnown RBP10.77□□□□□ -0.69
CPNE6-202ENST00000460657 Q5BKY6 102 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 AVPI1Q5T686 147 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 NR2C2APQ86WQ0 139 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 IL22RA1Q8N6P7 574 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 PHYHIPLQ96FC7 376 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 CXorf58Q96LI9 332 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 NMNAT2Q9BZQ4 307 aa10.77□□□□□ -0.69
CPNE6-202ENST00000460657 ALX4Q9H161 411 aaPredicted RBP10.77□□□□□ -0.69
CPNE6-202ENST00000460657 SHOXO15266 292 aa10.76□□□□□ -0.69
CPNE6-202ENST00000460657 SLC34A2O95436 690 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms