RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 S100A13Q99584 98 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 GPR27Q9NS67 375 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 TLX3O43711 291 aaPredicted RBP13.75□□□□□ -0.21
LMNB1-203ENST00000460265 CYB5AP00167 134 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 IFNA6P05013 189 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 EPHA8P29322 1005 aaPredicted RBP13.75□□□□□ -0.21
LMNB1-203ENST00000460265 MPGP29372 298 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 GGTLC2Q14390 218 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 SSX2Q16385 188 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 CDNFQ49AH0 187 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 PRSS35Q8N3Z0 413 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 OR2AK2Q8NG84 335 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 OR51S1Q8NGJ8 323 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 PAQR8Q8TEZ7 354 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 CASTOR1Q8WTX7 329 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 ASB17Q8WXJ9 295 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 C14orf79Q96F83 325 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 CCNL2Q96S94 520 aaPredicted RBP13.75□□□□□ -0.21
LMNB1-203ENST00000460265 MYOTQ9UBF9 498 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 COLQQ9Y215 455 aaPredicted RBP13.75□□□□□ -0.21
LMNB1-203ENST00000460265 IGHV5-10-1A0A0J9YXX1 117 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 F5H0A9 414 aaPredicted RBP13.75□□□□□ -0.21
LMNB1-203ENST00000460265 NQO2P16083 231 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 VAMP1P23763 118 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 HABP2Q14520 560 aaPredicted RBP13.75□□□□□ -0.21
LMNB1-203ENST00000460265 GALNTL5Q7Z4T8 443 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 RABEPKQ7Z6M1 372 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 SKA3Q8IX90 412 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 PHYHIPQ92561 330 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 DKKL1Q9UK85 242 aa13.75□□□□□ -0.21
LMNB1-203ENST00000460265 OR2AT4A6NND4 320 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 FADS1O60427 444 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 CLDN17P56750 224 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 EGR3Q06889 387 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 ECH1Q13011 328 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 COX15Q7KZN9 410 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 TEX19Q8NA77 164 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 CHST11Q9NPF2 352 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 A6NIZ1 184 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 ZNF28P17035 718 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 RAP1BP61224 184 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 RAP1AP62834 184 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 BEST3Q8N1M1 668 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 OR52N5Q8NH56 324 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 MIB2Q96AX9 1013 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 SLC25A38Q96DW6 304 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 RSRP1Q9BUV0 290 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 COMMD9Q9P000 198 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 CELSR3Q9NYQ7 3312 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 TMEM235A6NFC5 223 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 C5orf52A6NGY3 159 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 ITGA5P08648 1049 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 GALNSP34059 522 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 KIR3DL2P43630 455 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 FNDC7Q5VTL7 733 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 LCN10Q6JVE6 187 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 WDR74Q6RFH5 385 aaPredicted RBP13.74□□□□□ -0.21
LMNB1-203ENST00000460265 GTPBP8Q8N3Z3 284 aaPredicted RBP13.74□□□□□ -0.21
LMNB1-203ENST00000460265 HAVCR1Q96D42 359 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 MRPL22Q9NWU5 206 aaKnown RBP13.74□□□□□ -0.21
LMNB1-203ENST00000460265 FOXJ3Q9UPW0 622 aa13.74□□□□□ -0.21
LMNB1-203ENST00000460265 GPR37O15354 613 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 LMX1BO60663 402 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 RAB3DO95716 219 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 WNT11O96014 354 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 CD3DP04234 171 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 RPA2P15927 270 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 ADCYAP1P18509 176 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 APOBEC1P41238 236 aaKnown RBP13.73□□□□□ -0.21
LMNB1-203ENST00000460265 ARFRP1Q13795 201 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 TMEM205Q6UW68 189 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 APCDD1LQ8NCL9 501 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 AGBL5Q8NDL9 886 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 PLPP5Q8NEB5 264 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 RHBDD1Q8TEB9 315 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 HOXB13Q92826 284 aaPredicted RBP13.73□□□□□ -0.21
LMNB1-203ENST00000460265 NAT6Q93015 286 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 GPX7Q96SL4 187 aaPredicted RBP13.73□□□□□ -0.21
LMNB1-203ENST00000460265 A0A0D9SG52 128 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 NPIPA2E9PIF3 369 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 NPIPA3F8WFD2 350 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 IL5P05113 134 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 P2RY4P51582 365 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 PPIAP62937 165 aaKnown RBP13.73□□□□□ -0.21
LMNB1-203ENST00000460265 OR51E1Q8TCB6 317 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 C11orf40Q8WZ69 217 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 DNASE2BQ8WZ79 361 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 SSX3Q99909 188 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 MPIG6BO95866 241 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 DPP4P27487 766 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 STARD6P59095 220 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 AWAT2Q6E213 333 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 FAM57BQ71RH2 274 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 LRRTM1Q86UE6 522 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 KMT5CQ86Y97 462 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 LRRC75AQ8NAA5 344 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 S100PBPQ96BU1 408 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 SLAMF6Q96DU3 332 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 RHOVQ96L33 236 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 C1orf198Q9H425 327 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms