RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 GLYATL3Q5SZD4 288 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 BCL2L15Q5TBC7 163 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 SAMD5Q5TGI4 173 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 ASPHD2Q6ICH7 369 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 CD200R1LQ6Q8B3 271 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 DRAM2Q6UX65 266 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 RFPL4BQ6ZWI9 263 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 DPPA2Q7Z7J5 298 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 ZNF676Q8N7Q3 588 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 PGAM5Q96HS1 289 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 PPP1R3EQ9H7J1 279 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 NIPAL2Q9H841 368 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 NUFIP1Q9UHK0 495 aaKnown RBP9.48□□□□□ -0.89
SCN9A-205ENST00000454569 STUB1Q9UNE7 303 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 PKDREJQ9NTG1 2253 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 CHD3Q12873 2000 aaKnown RBP9.48□□□□□ -0.89
SCN9A-205ENST00000454569 IGHV2OR16-5A0A0B4J2B6 119 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 LOC107986453A0A1B0GWG9 222 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 ACOD1A6NK06 481 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 GABRPO00591 440 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 CD1AP06126 327 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 GABRA5P31644 462 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 APLNRP35414 380 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 SOX2P48431 317 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 ZNF92Q03936 586 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 HLXQ14774 488 aaPredicted RBP9.47□□□□□ -0.89
SCN9A-205ENST00000454569 MSMPQ1L6U9 139 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 DMRTC1Q5HYR2 192 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 ZNF808Q8N4W9 903 aaPredicted RBP9.47□□□□□ -0.89
SCN9A-205ENST00000454569 ITFG2Q969R8 447 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 MUCL1Q96DR8 90 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 FAM210AQ96ND0 272 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 OR14A2Q96R54 314 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 CXorf56Q9H5V9 222 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 EXOSC4Q9NPD3 245 aaKnown RBP9.47□□□□□ -0.89
SCN9A-205ENST00000454569 OBP2BQ9NPH6 170 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 GPR84Q9NQS5 396 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 TXNL4BQ9NX01 149 aaKnown RBP9.47□□□□□ -0.89
SCN9A-205ENST00000454569 ATPIF1Q9UII2 106 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 ZNF281Q9Y2X9 895 aa9.47□□□□□ -0.89
SCN9A-205ENST00000454569 TRBV5-5A0A0J9YX44 114 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 WIPF3A6NGB9 483 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 NAAAQ02083 359 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 ACSM3Q53FZ2 586 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 SPATA46Q5T0L3 261 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 C22orf42Q6IC83 251 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 MTFR2Q6P444 385 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 XKRXQ6PP77 449 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 UNQ9370/PRO34162Q6UXP9 181 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 FAM169BQ8N8A8 192 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 KBTBD8Q8NFY9 601 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 NDNFQ8TB73 568 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 FAM71F1Q96KD3 344 aaPredicted RBP9.46□□□□□ -0.89
SCN9A-205ENST00000454569 PTTG3PQ9NZH4 202 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 SSR3Q9UNL2 185 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 LRRK2Q5S007 2527 aa9.46□□□□□ -0.89
SCN9A-205ENST00000454569 TRDV1A0A1B0GX56 115 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 SMIM30A4D0T7 59 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 TMEM212A6NML5 194 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 GPRIN2O60269 458 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 SMPD2O60906 423 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 ISG15P05161 165 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 CLEC2LP0C7M8 214 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 ZNF182P17025 639 aaPredicted RBP9.46□□□□□ -0.9
SCN9A-205ENST00000454569 AGAP20933 346 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 ACKR3P25106 362 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 MRPL28Q13084 256 aaKnown RBP9.46□□□□□ -0.9
SCN9A-205ENST00000454569 TBC1D28Q2M2D7 210 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 ALKBH6Q3KRA9 238 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 GDPGP1Q6ZNW5 385 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 USP43Q70EL4 1123 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 RNF144BQ7Z419 303 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 CEACAM19Q7Z692 300 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 OR1J2Q8NGS2 313 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 KCNS3Q9BQ31 491 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 MED18Q9BUE0 208 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 OR10A4Q9H209 315 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 DCSTAMPQ9H295 470 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 CDH20Q9HBT6 801 aa9.46□□□□□ -0.9
SCN9A-205ENST00000454569 HELZ2Q9BYK8 2649 aaKnown RBP9.45□□□□□ -0.9
SCN9A-205ENST00000454569 CRYBG3Q68DQ2 2970 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 ATP6V1G2-DDX39BF2Z307 99 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 RGS9O75916 674 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-205ENST00000454569 PLA2G2AP14555 144 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 CCL1P22362 96 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 CD40P25942 277 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 SERPINB10P48595 397 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 UCP2P55851 309 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 FAM3AP98173 230 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 BSPH1Q075Z2 132 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 GK2Q14410 553 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-205ENST00000454569 ZMAT1Q5H9K5 638 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 OR14K1Q8NGZ2 314 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 NEUROG1Q92886 237 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 ADAT3Q96EY9 351 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-205ENST00000454569 REEP6Q96HR9 211 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 DERL3Q96Q80 235 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 NKX3-1Q99801 234 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-205ENST00000454569 SLC30A2Q9BRI3 323 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 COMMD4Q9H0A8 199 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms