RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 PGA3P0DJD8 388 aa8.64□□□□□ -1.03
CCDC171-203ENST00000449575 IFNGR2P38484 337 aa8.64□□□□□ -1.03
CCDC171-203ENST00000449575 PRPS1P60891 318 aa8.64□□□□□ -1.03
CCDC171-203ENST00000449575 RPS25P62851 125 aaKnown RBP8.64□□□□□ -1.03
CCDC171-203ENST00000449575 MESTQ5EB52 335 aa8.64□□□□□ -1.03
CCDC171-203ENST00000449575 LRRC28Q86X40 367 aaPredicted RBP8.64□□□□□ -1.03
CCDC171-203ENST00000449575 IQCF1Q8N6M8 205 aa8.64□□□□□ -1.03
CCDC171-203ENST00000449575 ZNF519Q8TB69 540 aa8.64□□□□□ -1.03
CCDC171-203ENST00000449575 ST8SIA2Q92186 375 aa8.64□□□□□ -1.03
CCDC171-203ENST00000449575 TXNIPQ9H3M7 391 aa8.64□□□□□ -1.03
CCDC171-203ENST00000449575 FN3KQ9H479 309 aa8.64□□□□□ -1.03
CCDC171-203ENST00000449575 KRCC1Q9NPI7 259 aaPredicted RBP8.64□□□□□ -1.03
CCDC171-203ENST00000449575 EXTL2Q9UBQ6 330 aa8.64□□□□□ -1.03
CCDC171-203ENST00000449575 NDRG3Q9UGV2 375 aa8.64□□□□□ -1.03
CCDC171-203ENST00000449575 KCNK7Q9Y2U2 307 aa8.64□□□□□ -1.03
CCDC171-203ENST00000449575 SF3B6Q9Y3B4 125 aaKnown RBP8.64□□□□□ -1.03
CCDC171-203ENST00000449575 CACNA1DQ01668 2161 aa8.64□□□□□ -1.03
CCDC171-203ENST00000449575 TRAV6A0A075B6T7 132 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 PQLC2LA1A4F0 135 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 SSNA1O43805 119 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 HLA-DPB1P04440 258 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 S100A6P06703 90 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 CD14P08571 375 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 ACVR1BP36896 505 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 AKR1D1P51857 326 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 RPL27P61353 136 aaKnown RBP8.63□□□□□ -1.03
CCDC171-203ENST00000449575 ETFDHQ16134 617 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 FBXL19-AS1Q494R0 122 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 SLC25A30Q5SVS4 291 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 Q6ZT83 130 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 LINC00471Q8N535 108 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 BVESQ8NE79 360 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 OR4Q3Q8NH05 313 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 OR6X1Q8NH79 312 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 MRPL13Q9BYD1 178 aaKnown RBP8.63□□□□□ -1.03
CCDC171-203ENST00000449575 CRLF2Q9HC73 371 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 PARPBPQ9NWS1 579 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 SPATA2Q9UM82 520 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 RCE1Q9Y256 329 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 FLNBO75369 2602 aaKnown RBP8.63□□□□□ -1.03
CCDC171-203ENST00000449575 A0A1W2PR80 420 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 PDCD5O14737 125 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 SLC2A10O95528 541 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 CXCL3P19876 107 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 CD79BP40259 229 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 TSPAN5P62079 268 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 DHODHQ02127 395 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 OTPQ5XKR4 325 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 BEND4Q6ZU67 534 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 C20orf196Q8IYI0 205 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 OR52I1Q8NGK6 324 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 OR2T35Q8NGX2 323 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 LINC01560Q8TB33 94 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 SCARB1Q8WTV0 552 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 RNASE6Q93091 150 aaKnown RBP8.63□□□□□ -1.03
CCDC171-203ENST00000449575 SLC25A44Q96H78 314 aaPredicted RBP8.63□□□□□ -1.03
CCDC171-203ENST00000449575 GPX7Q96SL4 187 aaPredicted RBP8.63□□□□□ -1.03
CCDC171-203ENST00000449575 IFT27Q9BW83 186 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 RERGLQ9H628 205 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 ASB6Q9NWX5 421 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 UPB1Q9UBR1 384 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 GTF2A1LQ9UNN4 478 aa8.63□□□□□ -1.03
CCDC171-203ENST00000449575 EXOSC1Q9Y3B2 195 aaKnown RBP8.63□□□□□ -1.03
CCDC171-203ENST00000449575 ZNF726A6NNF4 738 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 L7N2F9 121 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 BHLHE40O14503 412 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 GPR37O15354 613 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 RAD51DO75771 328 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 IGHMP01871 453 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 GALP22466 123 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 CALCRP30988 508 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 CDKN2AP42771 156 aaKnown RBP8.62□□□□□ -1.03
CCDC171-203ENST00000449575 PABPC1L2AQ5JQF8 200 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 SFRP5Q5T4F7 317 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 CD300LDQ6UXZ3 194 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 ZNF433Q8N7K0 673 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-203ENST00000449575 ARIH2OSQ8N7S6 290 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 KCTD12Q96CX2 325 aaKnown RBP8.62□□□□□ -1.03
CCDC171-203ENST00000449575 FOXN4Q96NZ1 517 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 TSSK2Q96PF2 358 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 KCNK17Q96T54 332 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 GPR35Q9HC97 309 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 CYSLTR2Q9NS75 346 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 ITPR2Q14571 2701 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 ABCA12Q86UK0 2595 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 OR6C65A6NJZ3 312 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 DNASE2O00115 360 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-203ENST00000449575 NUPL2O15504 423 aaKnown RBP8.62□□□□□ -1.03
CCDC171-203ENST00000449575 PRAF2O60831 178 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 H2AFB2P0C5Z0 115 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 HIST1H1CP16403 213 aaKnown RBP8.62□□□□□ -1.03
CCDC171-203ENST00000449575 COX5AP20674 150 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 RPL35P42766 123 aaKnown RBP8.62□□□□□ -1.03
CCDC171-203ENST00000449575 PITPNBP48739 271 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 FABP5Q01469 135 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 HIST3H3Q16695 136 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 CEACAM16Q2WEN9 425 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 ACSM5Q6NUN0 579 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 DPY19L2P2Q6ZN68 376 aa8.62□□□□□ -1.03
CCDC171-203ENST00000449575 ZNF600Q6ZNG1 722 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms