RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 OR5D18Q8NGL1 313 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 OR2AJ1Q8NGZ0 328 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 PAQR8Q8TEZ7 354 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 RNF133Q8WVZ7 376 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 WNT2BQ93097 391 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 MRGPRFQ96AM1 343 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 SHPKQ9UHJ6 478 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 SLC5A6Q9Y289 635 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 CSAG2Q9Y5P2 127 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 ZNF217O75362 1048 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 IGLV3-19P01714 112 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 CLRN1P58418 232 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 C17orf67Q0P5P2 114 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 SCRN3Q0VDG4 424 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 TMEM104Q8NE00 496 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 ROBO4Q8WZ75 1007 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 CHMP1AQ9HD42 196 aaPredicted RBP11.47□□□□□ -0.57
SHC1-210ENST00000448116 CA14Q9ULX7 337 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 PCDHB10Q9UN67 800 aa11.47□□□□□ -0.57
SHC1-210ENST00000448116 PHF3Q92576 2039 aaKnown RBP11.47□□□□□ -0.57
SHC1-210ENST00000448116 TMEM131Q92545 1883 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 A0A1W2PR77 199 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 SOCS1O15524 211 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 EFSO43281 561 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 HTR3BO95264 441 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 IGHMP01871 453 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 BCKDHBP21953 392 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 MMP16P51512 607 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 FOXK1P85037 733 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 MFAP5Q13361 173 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 INPP5JQ15735 1006 aaPredicted RBP11.46□□□□□ -0.57
SHC1-210ENST00000448116 RAB30Q15771 203 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 PAN3Q58A45 887 aaKnown RBP11.46□□□□□ -0.57
SHC1-210ENST00000448116 FAM69BQ5VUD6 431 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 OR10R2Q8NGX6 335 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 MFSD8Q8NHS3 518 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 MITD1Q8WV92 249 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 ASB13Q8WXK3 278 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 DDIT4LQ96D03 193 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 UCK1Q9HA47 277 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 SERINC1Q9NRX5 453 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 FAM206AQ9NX38 181 aa11.46□□□□□ -0.57
SHC1-210ENST00000448116 METTL12A8MUP2 240 aa11.46□□□□□ -0.58
SHC1-210ENST00000448116 DUX1O43812 170 aa11.46□□□□□ -0.58
SHC1-210ENST00000448116 CLDN6P56747 220 aa11.46□□□□□ -0.58
SHC1-210ENST00000448116 PPIAP62937 165 aaKnown RBP11.46□□□□□ -0.58
SHC1-210ENST00000448116 TMPPEQ6ZT21 453 aa11.46□□□□□ -0.58
SHC1-210ENST00000448116 FOXRED2Q8IWF2 684 aa11.46□□□□□ -0.58
SHC1-210ENST00000448116 GTPBP8Q8N3Z3 284 aaPredicted RBP11.46□□□□□ -0.58
SHC1-210ENST00000448116 MAFIPQ8WZ33 124 aa11.46□□□□□ -0.58
SHC1-210ENST00000448116 TSNAXQ99598 290 aaKnown RBP11.46□□□□□ -0.58
SHC1-210ENST00000448116 OR2S2Q9NQN1 319 aa11.46□□□□□ -0.58
SHC1-210ENST00000448116 MRPS28Q9Y2Q9 187 aaKnown RBP11.46□□□□□ -0.58
SHC1-210ENST00000448116 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 H3BMH7 237 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 SULT2B1O00204 365 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 GP1BAP07359 652 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 RAB6AP20340 208 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 SFTPDP35247 375 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 ZNF169Q14929 603 aaPredicted RBP11.45□□□□□ -0.58
SHC1-210ENST00000448116 TMEM88Q6PEY1 159 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 BEND4Q6ZU67 534 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 MOB3CQ70IA8 216 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 ST6GALNAC5Q9BVH7 336 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 WNT5BQ9H1J7 359 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 MYOZ1Q9NP98 299 aaPredicted RBP11.45□□□□□ -0.58
SHC1-210ENST00000448116 PPP4R1LQ9P1A2 415 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 ASH2LQ9UBL3 628 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 TRBV11-1A0A0K0K1C0 115 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 CRTAPO75718 401 aaPredicted RBP11.45□□□□□ -0.58
SHC1-210ENST00000448116 SLC25A4P12235 298 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 PSMB6P28072 239 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 SYT13Q7L8C5 426 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 SMRP1Q8NCR6 262 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 OR10S1Q8NGN2 331 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 RAB3CQ96E17 227 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 LOC390937A0A1W2PQ73 354 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 ANKUB1A6NFN9 424 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 SDCBPO00560 298 aaPredicted RBP11.45□□□□□ -0.58
SHC1-210ENST00000448116 ADAP1O75689 374 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 BPNT1O95861 308 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 APOBEC1P41238 236 aaKnown RBP11.45□□□□□ -0.58
SHC1-210ENST00000448116 OR3A4PP47883 348 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 ZNF41P51814 821 aaPredicted RBP11.45□□□□□ -0.58
SHC1-210ENST00000448116 DEGS2Q6QHC5 323 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 GALNTL5Q7Z4T8 443 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 EIF4E3Q8N5X7 224 aaKnown RBP11.45□□□□□ -0.58
SHC1-210ENST00000448116 ZNF441Q8N8Z8 693 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 ZDHHC22Q8N966 263 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 OR4K17Q8NGC6 315 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 ELP5Q8TE02 316 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 OR5B2Q96R09 309 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 ADAT1Q9BUB4 502 aaKnown RBP11.45□□□□□ -0.58
SHC1-210ENST00000448116 ELL3Q9HB65 397 aaPredicted RBP11.45□□□□□ -0.58
SHC1-210ENST00000448116 GPR84Q9NQS5 396 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 GSKIPQ9P0R6 139 aa11.45□□□□□ -0.58
SHC1-210ENST00000448116 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.44□□□□□ -0.58
SHC1-210ENST00000448116 DNASE2O00115 360 aaPredicted RBP11.44□□□□□ -0.58
SHC1-210ENST00000448116 GPR31O00270 319 aa11.44□□□□□ -0.58
SHC1-210ENST00000448116 RER1O15258 196 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms