RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SLIT2O94813 1529 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 H7C2Y5 167 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 hCG_2039718K7EN88 272 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 ITGB1BP1O14713 200 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 RAD51BO15315 384 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 SLC31A2O15432 143 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 EMC8O43402 210 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 SLC16A7O60669 478 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 KLHL2O95198 593 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 CHTF8P0CG12 524 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 PGA5P0DJD9 388 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 OR5H8P0DN80 308 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 ICAM2P13598 275 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 TCP1P17987 556 aaKnown RBP3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 ATF6P18850 670 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 PRKAR2BP31323 418 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 P2RY4P51582 365 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 FGF8P55075 233 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 AP1S2P56377 157 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 UBE2G2P60604 165 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 IFFO1Q0D2I5 559 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 PIGHQ14442 188 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 GCSAMLQ5JQS6 135 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 PAGE3Q5JUK9 113 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 ACTL10Q5JWF8 245 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 FMN1Q68DA7 1419 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 DENND4AQ7Z401 1863 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 RALGPS2Q86X27 583 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 PLCZ1Q86YW0 608 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 NKAIN4Q8IVV8 208 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 FBXO16Q8IX29 292 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 CBR4Q8N4T8 237 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 OR2L8Q8NGY9 312 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 OR2G3Q8NGZ4 309 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 RPUSD4Q96CM3 377 aaKnown RBP3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 ZFP3Q96NJ6 502 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 NICN1Q9BSH3 213 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 BEX2Q9BXY8 128 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 PLEKHA1Q9HB21 404 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 CCL28Q9NRJ3 127 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 MAT2BQ9NZL9 334 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 ZNF629Q9UEG4 869 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 TP53TG3Q9ULZ0 132 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 PUS1Q9Y606 427 aaKnown RBP eCLIP3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 SYCP2Q9BX26 1530 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 GPATCH8Q9UKJ3 1502 aaKnown RBP3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 PLEKHG1Q9ULL1 1385 aa3.23□□□□□ -1.89
HMGB1P48-201ENST00000446155 PLEKHH2Q8IVE3 1493 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 CDC42BPBQ9Y5S2 1711 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 INO80Q9ULG1 1556 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 CUL9Q8IWT3 2517 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 IGLV1-36A0A0B4J1U3 117 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 H3BNH8 94 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 SMLR1H3BR10 107 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 H7C1H1 209 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 GATCO43716 136 aaKnown RBP3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 TIMP1P01033 207 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 GIG44P09565 113 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 SLC35E2BP0CK96 405 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 PGA4P0DJD7 388 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 PGA3P0DJD8 388 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 IGHV3-43DP0DP04 118 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 TEAD1P28347 426 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 PFN2P35080 140 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 ARL2P36404 184 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 RBM34P42696 430 aaKnown RBP3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 MAGEA6P43360 314 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 UBE2E1P51965 193 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 DIO3P55073 304 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 ST3GAL4Q11206 333 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 DYNC1I2Q13409 638 aaKnown RBP3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 OR4D1Q15615 310 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 ZBTB6Q15916 424 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 LRRC10Q5BKY1 277 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 ATAD3CQ5T2N8 411 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 CASC10Q5T4H9 136 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 LINC00173Q6ZV60 143 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 ABHD13Q7L211 337 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 CHST4Q8NCG5 386 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 OR51G1Q8NGK1 321 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 OR10J6PQ8NGY7 276 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 MRAPQ8TCY5 172 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 C7orf33Q8WU49 177 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 UCN3Q969E3 161 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 IL22RA2Q969J5 263 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 SGTBQ96EQ0 304 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 UBE2E2Q96LR5 201 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 TSNAXQ99598 290 aaKnown RBP3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 SRRQ9GZT4 340 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 SIRT7Q9NRC8 400 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 SDHAF2Q9NX18 166 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 NKIRAS1Q9NYS0 192 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 SLC25A37Q9NYZ2 338 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 CYB5R1Q9UHQ9 305 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 CES1P1Q9UKY3 287 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 PSMD13Q9UNM6 376 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 KLF12Q9Y4X4 402 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 OR51B2Q9Y5P1 312 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 MRPS18BQ9Y676 258 aaKnown RBP3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 CEMIPQ8WUJ3 1361 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms