RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CENPMQ9NSP4 180 aa12.43□□□□□ -0.42
VPS52-212ENST00000445902 UFSP2Q9NUQ7 469 aa12.43□□□□□ -0.42
VPS52-212ENST00000445902 GPR132Q9UNW8 380 aa12.43□□□□□ -0.42
VPS52-212ENST00000445902 SLC17A4Q9Y2C5 497 aa12.43□□□□□ -0.42
VPS52-212ENST00000445902 CNTRLQ7Z7A1 2325 aa12.43□□□□□ -0.42
VPS52-212ENST00000445902 MUC22E2RYF6 1773 aaPredicted RBP12.42□□□□□ -0.42
VPS52-212ENST00000445902 ZNF727A8MUV8 499 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 NUDT21O43809 227 aaKnown RBP12.42□□□□□ -0.42
VPS52-212ENST00000445902 OR2C1O95371 312 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 CST4P01036 141 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 IFNA17P01571 189 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 PNMTP11086 282 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 NDUFB7P17568 137 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 FSTP19883 344 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 CST6Q15828 149 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 ACKR1Q16570 336 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 POC1AQ8NBT0 407 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 TSACCQ96A04 125 aaPredicted RBP12.42□□□□□ -0.42
VPS52-212ENST00000445902 TGM7Q96PF1 710 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 URGCP-MRPS24S4R325 110 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 A0A1W2PP11 408 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 A0A1W2PQU0 124 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 MEGF11A6BM72 1044 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 GPR89AB7ZAQ6 455 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 SOCS1O15524 211 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 GPR89BP0CG08 455 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 MPZP25189 248 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 ACTR1BP42025 376 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 EMP2P54851 167 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 EIF5AP63241 154 aaKnown RBP12.42□□□□□ -0.42
VPS52-212ENST00000445902 C1orf100Q5SVJ3 147 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 GFI1BQ5VTD9 330 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 MED25Q71SY5 747 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 PRR22Q8IZ63 422 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 CCDC54Q8NEL0 328 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 OR56B1Q8NGI3 324 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 OR14C36Q8NHC7 312 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 GTF3AQ92664 365 aaKnown RBP12.42□□□□□ -0.42
VPS52-212ENST00000445902 ERGIC1Q969X5 290 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 VWCEQ96DN2 955 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 FOXQ1Q9C009 403 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 OR52A1Q9UKL2 312 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 COA3Q9Y2R0 106 aaPredicted RBP12.42□□□□□ -0.42
VPS52-212ENST00000445902 MRPS23Q9Y3D9 190 aaKnown RBP12.42□□□□□ -0.42
VPS52-212ENST00000445902 RHBDD3Q9Y3P4 386 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 SEC16AO15027 2179 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 TMEM269A0A1B0GVZ9 245 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 H0Y8X5 98 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 LYL1P12980 280 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 ZNF708P17019 499 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 TOMM34Q15785 309 aaPredicted RBP12.42□□□□□ -0.42
VPS52-212ENST00000445902 GAB4Q2WGN9 574 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 METTL27Q8N6F8 245 aaPredicted RBP12.42□□□□□ -0.42
VPS52-212ENST00000445902 CCDC3Q9BQI4 270 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 RTBDNQ9BSG5 229 aaPredicted RBP12.42□□□□□ -0.42
VPS52-212ENST00000445902 ST6GALNAC5Q9BVH7 336 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 STARD10Q9Y365 291 aa12.42□□□□□ -0.42
VPS52-212ENST00000445902 PRSS37A4D1T9 235 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 PRR19A6NJB7 356 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 ZNF217O75362 1048 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 NUDT14O95848 222 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 MPIG6BO95866 241 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 PRH1P02810 166 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 HOXA5P20719 270 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 PMELP40967 661 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 CAMLGP49069 296 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 RPS23P62266 143 aaKnown RBP12.41□□□□□ -0.42
VPS52-212ENST00000445902 HMGN3Q15651 99 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 IAH1Q2TAA2 248 aaPredicted RBP12.41□□□□□ -0.42
VPS52-212ENST00000445902 EMC4Q5J8M3 183 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 ZNF343Q6P1L6 599 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 ANGPTL5Q86XS5 388 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 APOOQ9BUR5 198 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 TUBA4BQ9H853 241 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 GAR1Q9NY12 217 aaKnown RBP12.41□□□□□ -0.42
VPS52-212ENST00000445902 DOK5Q9P104 306 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 PRSS38A1L453 326 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 C2orf74A8MZ97 194 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 PET100P0DJ07 73 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 CCINQ13939 588 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 ZNF124Q15973 351 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 ZNF529Q6P280 563 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 SPNS3Q6ZMD2 512 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 DCXRQ7Z4W1 244 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 OR1J1Q8NGS3 322 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 OR52N5Q8NH56 324 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 HOXB13Q92826 284 aaPredicted RBP12.41□□□□□ -0.42
VPS52-212ENST00000445902 SLC22A18Q96BI1 424 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 ADAT3Q96EY9 351 aaPredicted RBP12.41□□□□□ -0.42
VPS52-212ENST00000445902 CHST5Q9GZS9 411 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 PRDM13Q9H4Q3 707 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 KCNJ16Q9NPI9 418 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 G6PC2Q9NQR9 355 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 HEBP2Q9Y5Z4 205 aa12.41□□□□□ -0.42
VPS52-212ENST00000445902 TDRD6O60522 2096 aaKnown RBP12.41□□□□□ -0.42
VPS52-212ENST00000445902 RP1P56715 2156 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 A0A0A6YYD4 124 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 HSPB2A8KAH6 182 aa12.4□□□□□ -0.42
VPS52-212ENST00000445902 HOXC4P09017 264 aaPredicted RBP12.4□□□□□ -0.42
VPS52-212ENST00000445902 FMODQ06828 376 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms