RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 SPRY1O43609 319 aaPredicted RBP9.4□□□□□ -0.9
CALD1-210ENST00000443197 SULT1B1O43704 296 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 PRAF2O60831 178 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 ADRB1P08588 477 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 FAM157BP0CG42 384 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 TSPAN7P41732 249 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 RAC3P60763 192 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 LINC00303Q3SY05 128 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 FAM198BQ6UWH4 519 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 RHOUQ7L0Q8 258 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 MKXQ8IYA7 352 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 REEP6Q96HR9 211 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 GPX7Q96SL4 187 aaPredicted RBP9.4□□□□□ -0.9
CALD1-210ENST00000443197 OBP2BQ9NPH6 170 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 RDH8Q9NYR8 311 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 OR14J1Q9UGF5 321 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 CLDN16Q9Y5I7 305 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 PHF3Q92576 2039 aaKnown RBP9.4□□□□□ -0.9
CALD1-210ENST00000443197 F5H5P2 479 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 SCGNO76038 276 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 GNRHRP30968 328 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 KIR3DL2P43630 455 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 MMP15P51511 669 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 RPS4XP62701 263 aaKnown RBP9.4□□□□□ -0.9
CALD1-210ENST00000443197 ARF1P84077 181 aaKnown RBP9.4□□□□□ -0.9
CALD1-210ENST00000443197 CLN3Q13286 438 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 ZNF766Q5HY98 468 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 LINC00114Q6XXX2 140 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 ASB5Q8WWX0 329 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 IP6K3Q96PC2 410 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 DUSP13Q9UII6 198 aa9.4□□□□□ -0.9
CALD1-210ENST00000443197 ZNF407Q9C0G0 2248 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 CCSO14618 274 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 PIN1P1O15428 100 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 LMX1BO60663 402 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 SPDEFO95238 335 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 EFNB2P52799 333 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 DLX5P56178 289 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 CD200R1LQ6Q8B3 271 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 LIX1LQ8IVB5 337 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 PRSS35Q8N3Z0 413 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 WDSUB1Q8N9V3 476 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 NFAM1Q8NET5 270 aaPredicted RBP9.4□□□□□ -0.91
CALD1-210ENST00000443197 STEAP2Q8NFT2 490 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 OR4C16Q8NGL9 310 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 PHB2Q99623 299 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 SLC5A7Q9GZV3 580 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 NXF2Q9GZY0 626 aaKnown RBP9.4□□□□□ -0.91
CALD1-210ENST00000443197 CNTD2Q9H8S5 307 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 PFDN2Q9UHV9 154 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 PCNX1Q96RV3 2341 aa9.4□□□□□ -0.91
CALD1-210ENST00000443197 TRGV5A0A0B4J1U4 118 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 AQP7P3A6NL99 342 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 BET1O15155 118 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 XRCC3O43542 346 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 GMDSO60547 372 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 ADH6P28332 368 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 SORDQ00796 357 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 SFRP5Q5T4F7 317 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 ANKRD16Q6P6B7 361 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 C17orf107Q6ZR85 190 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 GABRG1Q8N1C3 465 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 OR8B12Q8NGG6 310 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 YIPF5Q969M3 257 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 INTS12Q96CB8 462 aaKnown RBP9.39□□□□□ -0.91
CALD1-210ENST00000443197 KCNJ15Q99712 375 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 ZNF275Q9NSD4 429 aaPredicted RBP9.39□□□□□ -0.91
CALD1-210ENST00000443197 KCNS2Q9ULS6 477 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 FOXJ3Q9UPW0 622 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 PTPRSQ13332 1948 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 IGKV1D-43A0A0B4J1Z2 117 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 UPK3AO75631 287 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 LPLP06858 475 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 KLK2P20151 261 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 CPT2P23786 658 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 PLAURQ03405 335 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 GGTLC2Q14390 218 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 MEF2DQ14814 521 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 CDCP2Q5VXM1 449 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 BRICD5Q6PL45 260 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 C3P1Q6ZMU1 363 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 MEX3BQ6ZN04 569 aaKnown RBP9.39□□□□□ -0.91
CALD1-210ENST00000443197 TUSC5Q8IXB3 177 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 MEMO1Q9Y316 297 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 TMEM272A0A1B0GTI8 110 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 TRAPPC2LH3BP13 241 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 GP1BAP07359 652 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 UMODP07911 640 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 CNR1P21554 472 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 RBP2P50120 134 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 BAMBIQ13145 260 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 IKZF1Q13422 519 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 GRK1Q15835 563 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 ZADH2Q8N4Q0 377 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 DDOQ99489 341 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 TINAGL1Q9GZM7 467 aaPredicted RBP9.39□□□□□ -0.91
CALD1-210ENST00000443197 PPP1R3EQ9H7J1 279 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 MAB21L2Q9Y586 359 aa9.39□□□□□ -0.91
CALD1-210ENST00000443197 IGLV1-36A0A0B4J1U3 117 aa9.38□□□□□ -0.91
CALD1-210ENST00000443197 OR14I1A6ND48 311 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms