RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 ZNF250P15622 560 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 TUBG1P23258 451 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 CFL1P23528 166 aaKnown RBP11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 TGM4P49221 684 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 TAS2R43P59537 309 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 EMX1Q04741 257 aaPredicted RBP11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 NEDD8Q15843 81 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 AGAP6Q5VW22 663 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 RPL22L1Q6P5R6 122 aaKnown RBP11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 C20orf204Q6ZNR8 217 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 RDH10Q8IZV5 341 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 ZNF485Q8NCK3 441 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 OR56B2PQ8NGI1 322 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 OR5AK2Q8NH90 309 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 GTF3AQ92664 365 aaKnown RBP11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 UFD1Q92890 307 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 SPSB4Q96A44 273 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 NR1H4Q96RI1 486 aaPredicted RBP11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 CCL19Q99731 98 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 PDCD1LG2Q9BQ51 273 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 COMMD4Q9H0A8 199 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 RGCCQ9H4X1 137 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 ZNF696Q9H7X3 374 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 TUBG2Q9NRH3 451 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 PURGQ9UJV8 347 aaKnown RBP11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 SIRT4Q9Y6E7 314 aaPredicted RBP11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 USP9YO00507 2555 aaPredicted RBP11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 HRNRQ86YZ3 2850 aaPredicted RBP11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 A0A087WXM4 84 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 A0A0U1RQV5 110 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 TMEM212A6NML5 194 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 B9A039 149 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 DANCRP0C864 163 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 RAC2P15153 192 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 SELEP16581 610 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 CELP19835 753 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 PSMB9P28065 219 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 GSK3AP49840 483 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 CCR9P51686 369 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 FAM3AP98173 230 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 EFNB3Q15768 340 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 CCDC58Q4VC31 144 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 FDX2Q6P4F2 183 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 DOK3Q7L591 496 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 TSEN15Q8WW01 171 aaKnown RBP11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 HAVCR1Q96D42 359 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 SMIM19Q96E16 107 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 TRAF4Q9BUZ4 470 aaPredicted RBP11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 LIME1Q9H400 295 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 PLEKHA1Q9HB21 404 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 CBLN4Q9NTU7 201 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 ZNF391Q9UJN7 358 aa11.61□□□□□ -0.55
TM9SF4-204ENST00000442842 IGLV3-9A0A075B6K5 115 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 PLSCR5A0PG75 271 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 OR4C45A6NMZ5 311 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 CD300LBA8K4G0 201 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 M0R233 179 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 LMX1BO60663 402 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 ZFPL1O95159 310 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 IGLV3-1P01715 115 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 IGHV3-13P01766 116 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 RPSAP08865 295 aaKnown RBP11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 NAT2P11245 290 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 PCMT1P22061 227 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 ACHEP22303 614 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 CDKN1AP38936 164 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 TSTQ16762 297 aaKnown RBP11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 TMEM244Q5VVB8 128 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 LIPKQ5VXJ0 399 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 PAMR1Q6UXH9 720 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 KCTD8Q6ZWB6 473 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 EGFL6Q8IUX8 553 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 SEMA6DQ8NFY4 1073 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 OR13C3Q8NGS6 347 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 OR13C5Q8NGS8 318 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 OR10AC1Q8NH08 325 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 DVL3Q92997 716 aaPredicted RBP11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 OPALINQ96PE5 141 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 REPIN1Q9BWE0 567 aaKnown RBP11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 CACNG6Q9BXT2 260 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 TPK1Q9H3S4 243 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 MSL2Q9HCI7 577 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 VCX3AQ9NNX9 186 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 FBN2P35556 2912 aa11.6□□□□□ -0.55
TM9SF4-204ENST00000442842 DCHS2Q6V1P9 2916 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 A0A1B0GTI1 187 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 TRIM64A6NGJ6 449 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 A6NIN4 97 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 ZSCAN5BA6NJL1 495 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 ANKRD30BLA7E2S9 258 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 IQCF6A8MYZ5 107 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 OGG1O15527 345 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 SPRY3O43610 288 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 LILRA1O75019 489 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 MTRF1O75570 445 aaKnown RBP11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 DHRS3O75911 302 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 CD8AP01732 235 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 FAHP16930 419 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 KITLGP21583 273 aa11.59□□□□□ -0.55
TM9SF4-204ENST00000442842 ACKR3P25106 362 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms