RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 F3P13726 295 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 IL1RNP18510 177 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 MDKP21741 143 aaPredicted RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 BMP5P22003 454 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 DPP4P27487 766 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 PRDX3P30048 256 aaKnown RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 CCKARP32238 428 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 DCTDP32321 178 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 SOAT1P35610 550 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 SOX18P35713 384 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 MTNR1AP48039 350 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 HINT1P49773 126 aaPredicted RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 CCR5P51681 352 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 TAS2R19P59542 299 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ARF6P62330 175 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 EFNB1P98172 346 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 SMAGPQ0VAQ4 97 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 TAZQ16635 292 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 EIPR1Q53HC9 387 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 DCST2Q5T1A1 773 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 HENMT1Q5T8I9 393 aaKnown RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 ATP1A1-AS1Q5TC04 95 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 TMEM268Q5VZI3 342 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 WDR74Q6RFH5 385 aaPredicted RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 ZNF66Q6ZN08 573 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 VRK2Q86Y07 508 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 TMEM183AQ8IXX5 376 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 CPXM2Q8N436 756 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 OR6N2Q8NGY6 317 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 OR1P1Q8NH06 330 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 OR4K15Q8NH41 348 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 OR51A7Q8NH64 312 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ORAOV1Q8WV07 137 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 FRZBQ92765 325 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 IL22RA2Q969J5 263 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 TMEM186Q96B77 213 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 RASD2Q96D21 266 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 SAT2Q96F10 170 aaPredicted RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 TMEM19Q96HH6 336 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 MRGPRX3Q96LB0 322 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 SOSTQ9BQB4 213 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 DOHHQ9BU89 302 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 DPH1Q9BZG8 443 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 CNTD2Q9H8S5 307 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 LRTM1Q9HBL6 345 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 APOBEC3GQ9HC16 384 aaKnown RBP2.51□□□□□ -2.01
LIG4-203ENST00000442234 ADAP2Q9NPF8 381 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 TRIM36Q9NQ86 728 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 DDIT4Q9NX09 232 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 KLHL28Q9NXS3 571 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 OR6C3Q9NZP0 311 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 B3GAT1Q9P2W7 334 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 KLK11Q9UBX7 282 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 NAGKQ9UJ70 344 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 KCNE5Q9UJ90 142 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 RAB22AQ9UL26 194 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 CBLCQ9ULV8 474 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 NEU3Q9UQ49 428 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ZNF281Q9Y2X9 895 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 ARL5AQ9Y689 179 aa2.51□□□□□ -2.01
LIG4-203ENST00000442234 A0A087WV62 115 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 FBLL1A6NHQ2 334 aaKnown RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 GABARAPH6UMI1 98 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 LEFTY2O00292 366 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 ZNF354AO60765 605 aaPredicted RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 ARL6IP5O75915 188 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 NDUFB6O95139 128 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 TBX6O95947 436 aaPredicted RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 CST4P01036 141 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 TGFB1P01137 390 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 AMBPP02760 352 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 UMODP07911 640 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 IL6RP08887 468 aaPredicted RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 OR10J4P0C629 311 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 FGF5P12034 268 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 OSMP13725 252 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 COX7A2P14406 83 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 FDXRP22570 491 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 GNRHRP30968 328 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 ATP1B3P54709 279 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 CKS1BP61024 79 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 RPS14P62263 151 aaKnown RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 RPS23P62266 143 aaKnown RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 BTG2P78543 158 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 DLK1P80370 383 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 KLF9Q13886 244 aaPredicted RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 ZNF345Q14585 488 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 EXT1Q16394 746 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 GOLGA7BQ2TAP0 167 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 ELOA3BQ3SY89 546 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 RAB6CQ53S08 254 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 C10orf91Q5T1B1 145 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 C1orf194Q5T5A4 169 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 C15orf39Q6ZRI6 1047 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 CBLL1Q75N03 491 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 SLC16A9Q7RTY1 509 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 ERASQ7Z444 233 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 TMEM144Q7Z5S9 345 aa2.5□□□□□ -2.01
LIG4-203ENST00000442234 MRPL52Q86TS9 123 aaKnown RBP2.5□□□□□ -2.01
LIG4-203ENST00000442234 NIT1Q86X76 327 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms