RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 SRPK3Q9UPE1 567 aa14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 C5orf51A6NDU8 294 aa14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 ABCD4O14678 606 aa14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 GP1BAP07359 652 aa14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 HEXBP07686 556 aa14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 DEFA5Q01523 94 aa14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 MYBPHQ13203 477 aa14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 ATRAIDQ6UW56 229 aa14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 ABHD12BQ7Z5M8 362 aaPredicted RBP14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 ANKRD37Q7Z713 158 aa14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 UEVLDQ8IX04 471 aa14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 PHF3Q92576 2039 aaKnown RBP14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 NICN1Q9BSH3 213 aa14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 SDHAF3Q9NRP4 125 aa14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 PPP4R1LQ9P1A2 415 aa14.64□□□□□ -0.07
SEMA3B-207ENST00000441915 SULT2B1O00204 365 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 SSX5O60225 188 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 PLATP00750 562 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 TAS2R31P59538 309 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 RHBDD2Q6NTF9 364 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 GLIPR1L1Q6UWM5 242 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 NFAM1Q8NET5 270 aaPredicted RBP14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 TMEM185AQ8NFB2 350 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 MARCH1Q8TCQ1 289 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 LRRC46Q96FV0 321 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 TMEM41AQ96HV5 264 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 MRGPRX4Q96LA9 322 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 SPACA5Q96QH8 159 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 CHMP1AQ9HD42 196 aaPredicted RBP14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 C13orf42A0A1B0GVH6 325 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 DNASE2O00115 360 aaPredicted RBP14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 MYF5P13349 255 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 FOSL1P15407 271 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 ABOP16442 354 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 PSMB6P28072 239 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 PPIAP62937 165 aaKnown RBP14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 MC2RQ01718 297 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 NARS2Q96I59 477 aaKnown RBP14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 LPAR5Q9H1C0 372 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 PCED1AQ9H1Q7 454 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 CHRDQ9H2X0 955 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 PIGMQ9H3S5 423 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 MRPS28Q9Y2Q9 187 aaKnown RBP14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 LHFPL6Q9Y693 200 aa14.63□□□□□ -0.07
SEMA3B-207ENST00000441915 SDK1Q7Z5N4 2213 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 EXPH5Q8NEV8 1989 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 ETV2O00321 342 aaPredicted RBP14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 EFNA2O43921 213 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 MPIG6BO95866 241 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 IGHG1P01857 330 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 CRHP06850 196 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 SRFP11831 508 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 FOXK1P85037 733 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 PTCRAQ6ISU1 281 aaPredicted RBP14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 HOGA1Q86XE5 327 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 OR5T2Q8NGG2 359 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 TERB2Q8NHR7 220 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 FN3KRPQ9HA64 309 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 RALGAPA1Q6GYQ0 2036 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 CABIN1Q9Y6J0 2220 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 TRBV11-1A0A0K0K1C0 115 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 DBX1A6NMT0 343 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 F8W036 122 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 GSTP1P09211 210 aaKnown RBP14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 MSX1P28360 303 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 TMEM128Q5BJH2 165 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 WDR74Q6RFH5 385 aaPredicted RBP14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 UNQ6126/PRO20091Q6UXV3 157 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 PGAP1Q75T13 922 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 NOXO1Q8NFA2 376 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 OR4K17Q8NGC6 315 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 KCNG3Q8TAE7 436 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 RAB3CQ96E17 227 aa14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 ZNF768Q9H5H4 540 aaKnown RBP14.62□□□□□ -0.07
SEMA3B-207ENST00000441915 BCKDHBP21953 392 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 GABREP78334 506 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 CYCSP99999 105 aaKnown RBP14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 TMEM104Q8NE00 496 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 BPIFCQ8NFQ6 507 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 IGLV3-12A0A075B6K2 115 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 SIGLEC5O15389 551 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 PGA4P0DJD7 388 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 PGA3P0DJD8 388 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 SLC2A1P11166 492 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 PGAM2P15259 253 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 SERPINF1P36955 418 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 CX3CR1P49238 355 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 SIGLEC14Q08ET2 396 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 MICBQ29980 383 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 RTN4RL2Q86UN3 420 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 ARMC10Q8N2F6 343 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 NMES1Q9C002 83 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 ASH2LQ9UBL3 628 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 PCDHB10Q9UN67 800 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 CSAG2Q9Y5P2 127 aa14.61□□□□□ -0.07
SEMA3B-207ENST00000441915 HIST1H1DP16402 221 aaKnown RBP14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 CDAP32320 146 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 PLPPR5Q32ZL2 321 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 UQCC3Q6UW78 93 aa14.6□□□□□ -0.07
SEMA3B-207ENST00000441915 RNF144BQ7Z419 303 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms