RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 PLP2Q04941 152 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 MXD1Q05195 221 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 HNRNPA0Q13151 305 aaKnown RBP9.79□□□□□ -0.84
LINC00539-203ENST00000434601 LSAMPQ13449 338 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 GSG1Q2KHT4 349 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 RSPO1Q2MKA7 263 aaPredicted RBP9.79□□□□□ -0.84
LINC00539-203ENST00000434601 MDP1Q86V88 176 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 C17orf78Q8N4C9 275 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 CPEB3Q8NE35 698 aaKnown RBP9.79□□□□□ -0.84
LINC00539-203ENST00000434601 OR13C3Q8NGS6 347 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 TMEM106AQ96A25 262 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 SLC25A46Q96AG3 418 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 OR10A2Q9H208 303 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 SP140LQ9H930 580 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 B3GNT2Q9NY97 397 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 KCNN3Q9UGI6 736 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 AKAP6Q13023 2319 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 ABCA4P78363 2273 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 A0A0U1RQV5 110 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 IQCMA0A1B0GVH7 501 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 SMIM30A4D0T7 59 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 TBX1O43435 398 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 CLPXO76031 633 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 IGLV3-1P01715 115 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 CD2P06729 351 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 BMP5P22003 454 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 CCL1P22362 96 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 ANOS1P23352 680 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 APEX1P27695 318 aaKnown RBP9.78□□□□□ -0.84
LINC00539-203ENST00000434601 RORCP51449 518 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 TSC22D1Q15714 1073 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 SNAI3Q3KNW1 292 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 KRTAP21-3Q3LHN1 58 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF404Q494X3 552 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF474Q6S9Z5 364 aaPredicted RBP9.78□□□□□ -0.84
LINC00539-203ENST00000434601 BHLHA15Q7RTS1 189 aaPredicted RBP9.78□□□□□ -0.84
LINC00539-203ENST00000434601 LUZP2Q86TE4 346 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 NAA40Q86UY6 237 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 TPRA1Q86W33 373 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 COMMD2Q86X83 199 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF584Q8IVC4 421 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 DMRTC2Q8IXT2 367 aaPredicted RBP9.78□□□□□ -0.84
LINC00539-203ENST00000434601 OR52H1Q8NGJ2 320 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 MCFD2Q8NI22 146 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 OR51E1Q8TCB6 317 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 DACH2Q96NX9 599 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 BARHL1Q9BZE3 327 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 NXF2Q9GZY0 626 aaKnown RBP9.78□□□□□ -0.84
LINC00539-203ENST00000434601 SLITRK2Q9H156 845 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 TPK1Q9H3S4 243 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 OBP2BQ9NPH6 170 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 GPR84Q9NQS5 396 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF319Q9P2F9 582 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF629Q9UEG4 869 aaPredicted RBP9.78□□□□□ -0.84
LINC00539-203ENST00000434601 PMF1-BGLAPU3KQ54 211 aa9.78□□□□□ -0.84
LINC00539-203ENST00000434601 ANKHD1Q8IWZ3 2542 aaKnown RBP9.78□□□□□ -0.84
LINC00539-203ENST00000434601 A0A1B0GTI1 187 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 C5orf63A6NC05 138 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 NKX2-6A6NCS4 301 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 FAM90A27PA6NNH2 459 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 EEF1E1-BLOC1S5C9J1V9 151 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 EEF1E1O43324 174 aaKnown RBP9.77□□□□□ -0.85
LINC00539-203ENST00000434601 NCR1O76036 304 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 LCATP04180 440 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 ZNF12P17014 697 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 FSTP19883 344 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 IL32P24001 234 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 STOMP27105 288 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 APLNRP35414 380 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 CAV3P56539 151 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 TFF3Q07654 80 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 GFOD2Q3B7J2 385 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 DOK3Q7L591 496 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 TMEM200AQ86VY9 491 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 CCDC54Q8NEL0 328 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 ORAI1Q96D31 301 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 FAM71F1Q96KD3 344 aaPredicted RBP9.77□□□□□ -0.85
LINC00539-203ENST00000434601 TCF7L1Q9HCS4 588 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 EDARQ9UNE0 448 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 AMDHD2Q9Y303 409 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 A3GALT2U3KPV4 340 aa9.77□□□□□ -0.85
LINC00539-203ENST00000434601 LOC100509620A0A075B734 347 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 C5orf49A4QMS7 147 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 OR5H1A6NKK0 313 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 A8MXE2 369 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 PDCD5O14737 125 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 SERPINA5P05154 406 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 ZNF14P17017 642 aaPredicted RBP9.76□□□□□ -0.85
LINC00539-203ENST00000434601 SRMP19623 302 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 RAB3BP20337 219 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 PSMB1P20618 241 aaKnown RBP9.76□□□□□ -0.85
LINC00539-203ENST00000434601 CFL1P23528 166 aaKnown RBP9.76□□□□□ -0.85
LINC00539-203ENST00000434601 PEX19P40855 299 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 ART1P52961 327 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 OR10A3P58181 314 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 CEP78Q5JTW2 689 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 GLYATL3Q5SZD4 288 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 STAC2Q6ZMT1 411 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 CROCCP3Q8IVE0 287 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 WDR31Q8NA23 367 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms