RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 OR1J1Q8NGS3 322 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 VSTM2LQ96N03 204 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 TGM7Q96PF1 710 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 OR5B2Q96R09 309 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 KIR3DX1Q9H7L2 352 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 DOK5Q9P104 306 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 ZNF107Q9UII5 783 aaPredicted RBP10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 A0A0A6YYH2 397 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 A6NJ64 397 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 LDLRAD4O15165 306 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 NUDT21O43809 227 aaKnown RBP10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 IGFBP3P17936 291 aaPredicted RBP10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 PAX6P26367 422 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 RSU1Q15404 277 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 USF2Q15853 346 aaPredicted RBP10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 ZNF124Q15973 351 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 DCXRQ7Z4W1 244 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 HSD17B11Q8NBQ5 300 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 OR5H2Q8NGV7 314 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 SLC39A7Q92504 469 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 GPR132Q9UNW8 380 aa10.3□□□□□ -0.76
HMGCS1-202ENST00000433297 RANBP2P49792 3224 aaKnown RBP10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 A0A1W2PP11 408 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 SOCS1O15524 211 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 GLI4P10075 376 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 ZNF823P16415 610 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 AMY2BP19961 511 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 SERPINA2P20848 420 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 SNCAP37840 140 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 ZNF84P51523 738 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 TOMM34Q15785 309 aaPredicted RBP10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 TEX30Q5JUR7 227 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 TAAR9Q96RI9 348 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 LMF2Q9BU23 707 aaKnown RBP10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 APOOQ9BUR5 198 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 SUCNR1Q9BXA5 334 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 FAM212BQ9NTI7 297 aaPredicted RBP10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 MAFFQ9ULX9 164 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 HEBP2Q9Y5Z4 205 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 H0Y8X5 98 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 SCDO00767 359 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 HCRTR2O43614 444 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 JTBO76095 146 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 FGF19O95750 216 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 CD37P11049 281 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 SUPT4H1P63272 117 aaKnown RBP10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 SP3Q02447 781 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 FAM78AQ5JUQ0 283 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 GFI1BQ5VTD9 330 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 RPUSD3Q6P087 351 aaKnown RBP10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 ZNF343Q6P1L6 599 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 UNQ6494/PRO21346Q6UXR6 183 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 ARRDC1Q8N5I2 433 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 MR1Q95460 341 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 DGAT2Q96PD7 388 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 MEMO1Q9Y316 297 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 FREM3P0C091 2139 aa10.29□□□□□ -0.76
HMGCS1-202ENST00000433297 PRSS37A4D1T9 235 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 TAAR5O14804 337 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 HOXA5P20719 270 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 ASCL1P50553 236 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 INSM1Q01101 510 aaPredicted RBP10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 CCINQ13939 588 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 GAMTQ14353 236 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 CCDC54Q8NEL0 328 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 SSX3Q99909 188 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 GPR61Q9BZJ8 451 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 TCEAL2Q9H3H9 227 aaPredicted RBP10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 OPA3Q9H6K4 179 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 SLC5A6Q9Y289 635 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 GON4LQ3T8J9 2241 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 CDC14CA4D256 554 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 IFITM10A6NMD0 228 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 GPR89AB7ZAQ6 455 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 GPR89BP0CG08 455 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 ACRP10323 421 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 CDX1P47902 265 aaPredicted RBP10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 PPP1CAP62136 330 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 SURF2Q15527 256 aaPredicted RBP10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 SSX2Q16385 188 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 EMC4Q5J8M3 183 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 SOHLH1Q5JUK2 328 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 SFTPA2Q8IWL1 248 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 CA5BP1Q8WTZ4 195 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 GTF3AQ92664 365 aaKnown RBP10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 ERGIC1Q969X5 290 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 OR2M4Q96R27 311 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 ADOQ96SZ5 270 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 FOXQ1Q9C009 403 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 OR10A5Q9H207 317 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 EHFQ9NZC4 300 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 NOTCH4Q99466 2003 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 TGFBR3LH3BV60 316 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 ZNF708P17019 499 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 PPM1AP35813 382 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 IGFALSP35858 605 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 RBMXP38159 391 aaKnown RBP10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 CSNK2A1P68400 391 aaPredicted RBP10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 C4orf17Q53FE4 359 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 CSNK2A3Q8NEV1 391 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms