RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 NKX2-5P52952 324 aaPredicted RBP8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 POU4F2Q12837 409 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 GSG1Q2KHT4 349 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 ELFN2Q5R3F8 820 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 RSBN1Q5VWQ0 802 aaPredicted RBP8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 ASPHD2Q6ICH7 369 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 VHLLQ6RSH7 139 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 NR2C2APQ86WQ0 139 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 WFDC8Q8IUA0 241 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 GDPD1Q8N9F7 314 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 DTX3Q8N9I9 347 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 OR8B12Q8NGG6 310 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 NEUROG1Q92886 237 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 LYZL4Q96KX0 146 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 ZNF75AQ96N20 296 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 SNX18Q96RF0 628 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 VKORC1Q9BQB6 163 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 LINC00470Q9BZP3 86 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 G6PC2Q9NQR9 355 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 FAM206AQ9NX38 181 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 A0A0B4J203 849 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 A1L4Q6 167 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 RPL36A-HNRNPH2H7BZ11 118 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 SRSF10O75494 262 aaKnown RBP8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 TTRP02766 147 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 HRGP04196 525 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 SFTPCP11686 197 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 STOMP27105 288 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 GABRA5P31644 462 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 DDOSTP39656 456 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 OR10A3P58181 314 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 SCN1BQ07699 218 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 SRSF1Q07955 248 aaKnown RBP eCLIP8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 ACSM1Q08AH1 577 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 SF3B4Q15427 424 aaKnown RBP eCLIP8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 FOXL2NBQ6ZUU3 175 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 BHLHA15Q7RTS1 189 aaPredicted RBP8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 HDDC2Q7Z4H3 204 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 CA5BP1Q8WTZ4 195 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 UFD1Q92890 307 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 WFIKKN1Q96NZ8 548 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 KCNK15Q9H427 330 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 ZNF221Q9UK13 617 aa8.25□□□□□ -1.09
HMGCLL1-206ENST00000428842 TRDV1A0A1B0GX56 115 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 ZNF878C9JN71 531 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 M0R135 149 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 M0R1B8 84 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 LCATP04180 440 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 THBDP07204 575 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 CSF3P09919 207 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 COX5AP20674 150 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 CALCRP30988 508 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 SDC2P34741 201 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 RIDAP52758 137 aaKnown RBP8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 ACTC1P68032 377 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 ACTA1P68133 377 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 CDK5R1Q15078 307 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 NDUFA5Q16718 116 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 MSMPQ1L6U9 139 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 ATAD3CQ5T2N8 411 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 FAM131AQ6UXB0 335 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 RFPL4BQ6ZWI9 263 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 ABHD12BQ7Z5M8 362 aaPredicted RBP8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 MRGPRGQ86SM5 289 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 GJC3Q8NFK1 279 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 OR52N1Q8NH53 320 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 OR1F12Q8NHA8 337 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 ZNF799Q96GE5 643 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 ST6GAL2Q96JF0 529 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 SOSTQ9BQB4 213 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 MYEF2Q9P2K5 600 aaKnown RBP8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 RBMX2Q9Y388 322 aaKnown RBP8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 TRAV8-7A0A075B6U6 113 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 HMX3A6NHT5 357 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 OR4C45A6NMZ5 311 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 PIN1P1O15428 100 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 GPRIN2O60269 458 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 FARS2O95363 451 aaKnown RBP8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 CST2P09228 141 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 CECR9P0C854 216 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 AZGP1P25311 298 aaKnown RBP8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 LSM6P62312 80 aaKnown RBP8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 KCNMB1Q16558 191 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 DDI2Q5TDH0 399 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 HIST2H2BCQ6DN03 193 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 DMKNQ6E0U4 476 aaPredicted RBP8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 PRSS45Q7RTY3 260 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 OR5AS1Q8N127 324 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 ZNF676Q8N7Q3 588 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 OR51A2Q8NGJ7 313 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 AP3S1Q92572 193 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 C4orf45Q96LM5 186 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 COQ7Q99807 217 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 SFXN3Q9BWM7 321 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 JAM3Q9BX67 310 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 PBOV1Q9GZY1 135 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 SLC22A4Q9H015 551 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 TRIM36Q9NQ86 728 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 GPR84Q9NQS5 396 aa8.24□□□□□ -1.09
HMGCLL1-206ENST00000428842 GLRX2Q9NS18 164 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms