RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 FAM71E2Q8N5Q1 922 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 WDSUB1Q8N9V3 476 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 OR6K3Q8NGY3 331 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 HAS2Q92819 552 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 RIMS4Q9H426 269 aaPredicted RBP12.41□□□□□ -0.42
RPL28-202ENST00000426763 TET1Q8NFU7 2136 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 RER1O15258 196 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 LYZL6O75951 148 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 SP1P08047 785 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 RAB11AP62491 216 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 SKP2Q13309 424 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 OSR2Q8N2R0 312 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 ARL11Q969Q4 196 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 SPSB1Q96BD6 273 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 DOK1Q99704 481 aa12.41□□□□□ -0.42
RPL28-202ENST00000426763 ADAT1Q9BUB4 502 aaKnown RBP12.41□□□□□ -0.42
RPL28-202ENST00000426763 C11orf54Q9H0W9 315 aaPredicted RBP12.41□□□□□ -0.42
RPL28-202ENST00000426763 TRBV5-3A0A0A0MS03 114 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 A0A1W2PR80 420 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 IFNA10P01566 189 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 CD79BP40259 229 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 SORDQ00796 357 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 FLRT3Q9NZU0 649 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 ST3GAL6Q9Y274 331 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 A0A0G2JMZ2 1700 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 LRRC37A2A6NM11 1700 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 CDKN2AP42771 156 aaKnown RBP12.4□□□□□ -0.42
RPL28-202ENST00000426763 BLOC1S1P78537 153 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 ZNF774Q6NX45 483 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 RND1Q92730 232 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 OR5B12Q96R08 314 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 C20orf85Q9H1P6 137 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 TRAV1-2A0A0B4J238 106 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 CLDN1O95832 211 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 LIFP15018 202 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 CD1EP15812 388 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 S100A2P29034 98 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 NUFIP2Q7Z417 695 aaKnown RBP12.4□□□□□ -0.42
RPL28-202ENST00000426763 OR2M3Q8NG83 312 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 OR10X1Q8NGY0 326 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 CLDN23Q96B33 292 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.4□□□□□ -0.42
RPL28-202ENST00000426763 TMEM235A6NFC5 223 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 LUMP51884 338 aaPredicted RBP12.4□□□□□ -0.42
RPL28-202ENST00000426763 GNG3P63215 75 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 HBG1P69891 147 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 HBG2P69892 147 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 OR52I2Q8NH67 350 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 ASB10Q8WXI3 467 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 HES7Q9BYE0 225 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 METTL17Q9H7H0 456 aaPredicted RBP12.4□□□□□ -0.42
RPL28-202ENST00000426763 GCM1Q9NP62 436 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 ASF1BQ9NVP2 202 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 PPP1R14DQ9NXH3 145 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 CROCCQ5TZA2 2017 aa12.4□□□□□ -0.42
RPL28-202ENST00000426763 MIA3Q5JRA6 1907 aa12.4□□□□□ -0.43
RPL28-202ENST00000426763 EPPINO95925 133 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 MGMTP16455 207 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 GPM6AP51674 278 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 CCR6P51684 374 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 OR2Z1Q8NG97 314 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 OR51S1Q8NGJ8 323 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 SEH1LQ96EE3 360 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 CSF2RBP32927 897 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 OR10A3P58181 314 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 SLC35G3Q8N808 338 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 AMDHD2Q9Y303 409 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 KITLGP21583 273 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 THSD4Q6ZMP0 1018 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 ZAR1Q86SH2 424 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 Q8IYB0 196 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 YIPF6Q96EC8 236 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 ANKRD34BA5PLL1 514 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 TSPAN9O75954 239 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 HLA-HP01893 362 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 ZNF17P17021 662 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 ZNF468Q5VIY5 522 aaPredicted RBP12.39□□□□□ -0.43
RPL28-202ENST00000426763 ELP2Q6IA86 826 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 RHNO1Q9BSD3 238 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 FBXL2Q9UKC9 423 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 CDC42EP2O14613 210 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 ALOX5APP20292 161 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 OPRM1P35372 400 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 GPR12P47775 334 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 SHEQ5VZ18 495 aa12.39□□□□□ -0.43
RPL28-202ENST00000426763 RP1L1Q8IWN7 2480 aaPredicted RBP12.38□□□□□ -0.43
RPL28-202ENST00000426763 IGHV1-45A0A0A0MS14 117 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 C17orf112F2Z3M2 114 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 ADGRG3Q86Y34 549 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 ARHGEF39Q8N4T4 335 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 OR13G1Q8NGZ3 307 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 OR2AE1Q8NHA4 323 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 SLA2Q9H6Q3 261 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 KCNJ16Q9NPI9 418 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 TNFSF12O43508 249 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 CNIH1O95406 144 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 AKR1C1Q04828 323 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 CSRP2Q16527 193 aa12.38□□□□□ -0.43
RPL28-202ENST00000426763 IAH1Q2TAA2 248 aaPredicted RBP12.38□□□□□ -0.43
RPL28-202ENST00000426763 KANSL1Q7Z3B3 1105 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms