RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 ECH1Q13011 328 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 KRTAP24-1Q3LI83 254 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 TEX30Q5JUR7 227 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 SLC35D3Q5M8T2 416 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 NXNL2Q5VZ03 156 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 MEPCEQ7L2J0 689 aaKnown RBP10.72□□□□□ -0.69
GPC1-204ENST00000426280 PRSS45Q7RTY3 260 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 DPY19L4Q7Z388 723 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 PACRGLQ8N7B6 248 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 OR5L1Q8NGL2 311 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 OR8J1Q8NGP2 316 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 CYGBQ8WWM9 190 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 RAB1CQ92928 201 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 DVL3Q92997 716 aaPredicted RBP10.72□□□□□ -0.69
GPC1-204ENST00000426280 ZNF799Q96GE5 643 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 ZNF582Q96NG8 517 aaPredicted RBP10.72□□□□□ -0.69
GPC1-204ENST00000426280 DIRC2Q96SL1 478 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 ABHD6Q9BV23 337 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 MMP26Q9NRE1 261 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 IMPAD1Q9NX62 359 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 UBAP1Q9NZ09 502 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 H2AFY2Q9P0M6 372 aaPredicted RBP10.72□□□□□ -0.69
GPC1-204ENST00000426280 LPAR3Q9UBY5 353 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 IL19Q9UHD0 177 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 ARHGAP32A7KAX9 2087 aa10.72□□□□□ -0.69
GPC1-204ENST00000426280 ISPDA4D126 451 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 C3orf80F5H4A9 247 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 TMEM178BH3BS89 294 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 J3QW42 95 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 SLC16A6O15403 523 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 ENTPD6O75354 484 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 APOL3O95236 402 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 MMP16P51512 607 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 TPTEP56180 551 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 EIF2B1Q14232 305 aaKnown RBP10.71□□□□□ -0.69
GPC1-204ENST00000426280 MPPED2Q15777 294 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 PRAMEF6Q5VXH4 476 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 FAHD2BQ6P2I3 314 aaPredicted RBP10.71□□□□□ -0.69
GPC1-204ENST00000426280 SHFQ7M4L6 423 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 MOGAT3Q86VF5 341 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 GLCCI1Q86VQ1 547 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 LRRC28Q86X40 367 aaPredicted RBP10.71□□□□□ -0.69
GPC1-204ENST00000426280 ENTHD1Q8IYW4 607 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 C19orf18Q8NEA5 215 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 ZNF555Q8NEP9 628 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 OR13G1Q8NGZ3 307 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 SGK3Q96BR1 496 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 FAHD2AQ96GK7 314 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 COG8Q96MW5 612 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 RDH12Q96NR8 316 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 KCNJ15Q99712 375 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 REPIN1Q9BWE0 567 aaKnown RBP10.71□□□□□ -0.69
GPC1-204ENST00000426280 TMPRSS13Q9BYE2 586 aa10.71□□□□□ -0.69
GPC1-204ENST00000426280 CD300LBA8K4G0 201 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 RNF212BA8MTL3 300 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 PRR32B1ATL7 298 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 TRAPPC2LH3BP13 241 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 GABRB1P18505 474 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 CA6P23280 308 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 SLC6A9P48067 706 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 ADARB1P78563 741 aaKnown RBP10.7□□□□□ -0.7
GPC1-204ENST00000426280 LCN2P80188 198 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 ZMAT1Q5H9K5 638 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 LCN1P1Q5VSP4 162 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 PGAP1Q75T13 922 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 DHRSXQ8N5I4 330 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 RFLNBQ8N5W9 214 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 OR51F2Q8NH61 342 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 THEM6Q8WUY1 208 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 TIMD4Q96H15 378 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 GAL3ST1Q99999 423 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 COPS4Q9BT78 406 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 TTTY10Q9BZA0 68 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 TMEM165Q9HC07 324 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 C8orf4Q9NR00 106 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 TMEM100Q9NV29 134 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 OPN4Q9UHM6 478 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 COPS3Q9UNS2 423 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 PPP1R3CQ9UQK1 317 aa10.7□□□□□ -0.7
GPC1-204ENST00000426280 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.7□□□□□ -0.7
GPC1-204ENST00000426280 LOC105371242A0A075B767 164 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 SLC22A31A6NKX4 558 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 PSMD9O00233 223 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 IFNA2P01563 188 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 ADRA2CP18825 462 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 TNFRSF1AP19438 455 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 HTR1FP30939 366 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 AQP4P55087 323 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 SNRPGP62308 76 aaKnown RBP10.69□□□□□ -0.7
GPC1-204ENST00000426280 BTG1P62324 171 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 RIPK1Q13546 671 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 DRAM2Q6UX65 266 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 LYPD2Q6UXB3 125 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 SLC16A9Q7RTY1 509 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 GID4Q8IVV7 300 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 OR51G2Q8NGK0 314 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 RHOXF1Q8NHV9 184 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 OTOSQ8NHW6 89 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 RNF133Q8WVZ7 376 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 APH1BQ8WW43 257 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms