RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 LRRN3E7EW58 273 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 C11orf98E9PRG8 122 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 BLOC1S5-TXNDC5H3BN57 136 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 hCG_2039718K7EN88 272 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 KPNA4O00629 521 aaPredicted RBP2.13□□□□□ -2.07
VPS13A-208ENST00000423463 HS3ST1O14792 307 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 RNF13O43567 381 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 LMX1BO60663 402 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 ENTPD5O75356 428 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 UPK3AO75631 287 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 LYZL6O75951 148 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 GADD45GO95257 159 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 IGHV3-9P01782 118 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 NR2C1P13056 603 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 ATP6V1B2P21281 511 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 PTAFRP25105 342 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 IFNGR2P38484 337 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 AQP2P41181 271 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 PRPS1P60891 318 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 VLDLRP98155 873 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 POU3F1Q03052 451 aaPredicted RBP2.13□□□□□ -2.07
VPS13A-208ENST00000423463 RPL18Q07020 188 aaKnown RBP2.13□□□□□ -2.07
VPS13A-208ENST00000423463 GK3PQ14409 553 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 PPA1Q15181 289 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 TAB1Q15750 504 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 ZBED5Q49AG3 693 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 C9orf152Q5JTZ5 239 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 NCMAPQ5T1S8 102 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 ADAM5Q6NVV9 412 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 PODNL1Q6PEZ8 512 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 TBPL2Q6SJ96 375 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 USP43Q70EL4 1123 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 SMIM29Q86T20 159 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 CDC20BQ86Y33 519 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 ZDHHC21Q8IVQ6 265 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 NRMQ8IXM6 262 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 TMEM123Q8N131 208 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 LRRC17Q8N6Y2 441 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 FAM86B1Q8N7N1 296 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 WDR31Q8NA23 367 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 OR6N1Q8NGY5 312 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 PFN4Q8NHR9 129 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 FNDC8Q8TC99 324 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 SLC7A13Q8TCU3 470 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 BCL2L2Q92843 193 aaPredicted RBP2.13□□□□□ -2.07
VPS13A-208ENST00000423463 TMEM54Q969K7 222 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 SLC25A44Q96H78 314 aaPredicted RBP2.13□□□□□ -2.07
VPS13A-208ENST00000423463 TNFRSF13CQ96RJ3 184 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 SEPHS2Q99611 448 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 TXNIPQ9H3M7 391 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 YY1AP1Q9H869 796 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 SLC17A5Q9NRA2 495 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 RHCGQ9UBD6 479 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 SEC14L4Q9UDX3 406 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 MGAT4BQ9UQ53 548 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 AURKCQ9UQB9 309 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 POFUT2Q9Y2G5 429 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 SLC25A15Q9Y619 301 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 INTS1Q8N201 2190 aaKnown RBP2.13□□□□□ -2.07
VPS13A-208ENST00000423463 HCFC1P51610 2035 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 ARPC4-TTLL3A0A0A6YYG9 625 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 SH3PXD2BA1X283 911 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 A6NIZ1 184 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 CLOCKO15516 846 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 RAD51DO75771 328 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 PDE5AO76074 875 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 IGLV2-11P01706 119 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 IGHG1P01857 330 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 IGHMP01871 453 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 SAGP10523 405 aaPredicted RBP2.13□□□□□ -2.07
VPS13A-208ENST00000423463 CBR1P16152 277 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 ACADSP16219 412 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 PTNP21246 168 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 LOXP28300 417 aaPredicted RBP2.13□□□□□ -2.07
VPS13A-208ENST00000423463 RRM2P31350 389 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 MAGEA2P43356 314 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 OMPP47874 163 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 CSNK1A1P48729 337 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 DAP3P51398 398 aaKnown RBP2.13□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF133P52736 654 aaPredicted RBP2.13□□□□□ -2.07
VPS13A-208ENST00000423463 BIDP55957 195 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 RAP1BP61224 184 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 RPS4XP62701 263 aaKnown RBP2.13□□□□□ -2.07
VPS13A-208ENST00000423463 RAP1AP62834 184 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 CAMK2DQ13557 499 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 TSC22D1Q15714 1073 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 ACKR1Q16570 336 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 CEACAM16Q2WEN9 425 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 FGD3Q5JSP0 725 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 ARMC4Q5T2S8 1044 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 DHRS7BQ6IAN0 325 aaPredicted RBP2.13□□□□□ -2.07
VPS13A-208ENST00000423463 C1orf94Q6P1W5 598 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 KRT77Q7Z794 578 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 DPPA2Q7Z7J5 298 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 OAFQ86UD1 273 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 CCDC190Q86UF4 302 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 LRRC75AQ8NAA5 344 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 OR4K5Q8NGD3 323 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 OR1K1Q8NGR3 316 aa2.13□□□□□ -2.07
VPS13A-208ENST00000423463 OR51A7Q8NH64 312 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms