RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 SPICQ8N5J4 248 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 OR52N4Q8NGI2 321 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 CCDC74BQ96LY2 380 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 CMTM3Q96MX0 182 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 UTP23Q9BRU9 249 aaKnown RBP11.18□□□□□ -0.62
CLCN4-203ENST00000421085 FGF21Q9NSA1 209 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 YTHDF2Q9Y5A9 579 aaKnown RBP11.18□□□□□ -0.62
CLCN4-203ENST00000421085 UBE2L5PA0A1B0GUS4 154 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 HSBP1O75506 76 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 MOB1BQ7L9L4 216 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 SLC38A6Q8IZM9 456 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 APH1AQ96BI3 265 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 PRRX2Q99811 253 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 NUDT9Q9BW91 350 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 MARCH5Q9NX47 278 aa11.18□□□□□ -0.62
CLCN4-203ENST00000421085 C5P01031 1676 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 DSCR3O14972 297 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 TBXA2RP21731 343 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 IRS1P35568 1242 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 C1QTNF12Q5T7M4 302 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 EDAQ92838 391 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 PGFP49763 221 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 PMS2P11Q13670 270 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 SLC25A43Q8WUT9 341 aaPredicted RBP11.17□□□□□ -0.62
CLCN4-203ENST00000421085 ERGIC1Q969X5 290 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 LAT2Q9GZY6 243 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 RAB18Q9NP72 206 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 MED29Q9NX70 200 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 OR5K3A6NET4 321 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 RGS13O14921 159 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 ARPC3O15145 178 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 ICOSLGO75144 302 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 ONECUT2O95948 504 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 MMP7P09237 267 aaPredicted RBP11.17□□□□□ -0.62
CLCN4-203ENST00000421085 CSN1S1P47710 185 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 HIST1H3AP68431 136 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 ELFN2Q5R3F8 820 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 LYSMD4Q5XG99 296 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 CLEC18AA5D8T8 446 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 TLCD2A6NGC4 264 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 DBX1A6NMT0 343 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 ZNF749O43361 778 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 GPR12P47775 334 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 RAG2P55895 527 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 DHRS2Q13268 280 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 RTL10Q7L3V2 364 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 CLEC18CQ8NCF0 446 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 WSB1Q9Y6I7 421 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 IGHV3-64DA0A0J9YX35 117 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 A0A1W2PNR3 127 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 TCRBV16S1A1N1A0A5B0 115 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 CD22P20273 847 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 ELAVL1Q15717 326 aaKnown RBP11.17□□□□□ -0.62
CLCN4-203ENST00000421085 NCMAPQ5T1S8 102 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 CAMKMTQ7Z624 323 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 SLC35B3Q9H1N7 401 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 TXNIPQ9H3M7 391 aa11.17□□□□□ -0.62
CLCN4-203ENST00000421085 A0A1W2PPH5 198 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 NKX6-3A6NJ46 265 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 SH2D1BO14796 132 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 PRKNO60260 465 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-203ENST00000421085 CNIH1O95406 144 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 PNLIPRP3Q17RR3 467 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 ZDHHC22Q8N966 263 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 TRAV34A0A0B4J273 112 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 LOC102723971A0A1B0GUV8 181 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 PRR35P0CG20 571 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 IL3RAP26951 378 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 SELENOPP49908 381 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 MVDP53602 400 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 C21orf62-AS1Q17RA5 79 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 UBE3DQ7Z6J8 389 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 OR6S1Q8NH40 331 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 POM121Q96HA1 1249 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 CDCA3Q99618 268 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-203ENST00000421085 FBXO34Q9NWN3 711 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 CLDN34H7C241 214 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 TSPAN12O95859 305 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 ZNF250P15622 560 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 PPP1R1AQ13522 171 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 OR8G1Q15617 311 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 TMEM183BQ1AE95 376 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 SP6Q3SY56 376 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 CIB3Q96Q77 187 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-203ENST00000421085 LYRM2Q9NU23 88 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-203ENST00000421085 TBC1D29Q9UFV1 150 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 TIMM10BQ9Y5J6 103 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 CHD4Q14839 1912 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 MED19A0JLT2 244 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-203ENST00000421085 AP4M1O00189 453 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 ABCD4O14678 606 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 ALOX12BO75342 701 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 CST2P09228 141 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 LIMS3P0CW19 117 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 LIMS4P0CW20 117 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 SEZ6L2Q6UXD5 910 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 CISD2Q8N5K1 135 aaKnown RBP11.16□□□□□ -0.62
CLCN4-203ENST00000421085 MS4A10Q96PG2 267 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 GNB4Q9HAV0 340 aa11.16□□□□□ -0.62
CLCN4-203ENST00000421085 DECR2Q9NUI1 292 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms