RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 NAA40Q86UY6 237 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 SERPINA12Q8IW75 414 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 CDH26Q8IXH8 852 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 RDH10Q8IZV5 341 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 OR51A4Q8NGJ6 313 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 OR14K1Q8NGZ2 314 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 PRR7Q8TB68 274 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 OR51E1Q8TCB6 317 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 SLC7A6Q92536 515 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 AKAP1Q92667 903 aaKnown RBP eCLIP12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 S100PBPQ96BU1 408 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 MUCL1Q96DR8 90 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 REPIN1Q9BWE0 567 aaKnown RBP12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 ACTR6Q9GZN1 396 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 SLIRPQ9GZT3 109 aaKnown RBP12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 RNF167Q9H6Y7 350 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 SLC24A3Q9HC58 644 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 NOX4Q9NPH5 578 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 GPR84Q9NQS5 396 aa12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 ERRFI1Q9UJM3 462 aaPredicted RBP12.35□□□□□ -0.43
SHMT1P1-201ENST00000419974 ZGRF1Q86YA3 2104 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 A0A075B6Q4 140 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 SHISA3A0PJX4 238 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 MEGF11A6BM72 1044 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 P2RY10O00398 339 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 LCATP04180 440 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 EPXP11678 715 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 CCKARP32238 428 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 SERPINB10P48595 397 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 RORCP51449 518 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 SEZ6L2Q6UXD5 910 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 PGAP1Q75T13 922 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 UTS2BQ765I0 119 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 ZNF808Q8N4W9 903 aaPredicted RBP12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 OR5L1Q8NGL2 311 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 OR13C5Q8NGS8 318 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 OR10AC1Q8NH08 325 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 PP6455Q8WZ26 134 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 RNASE6Q93091 150 aaKnown RBP12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 KCTD12Q96CX2 325 aaKnown RBP12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 LRRC46Q96FV0 321 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 CCDC120Q96HB5 630 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 LYZL4Q96KX0 146 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 SLITRK2Q9H156 845 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 SH3BGRL2Q9UJC5 107 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 GTF2A1LQ9UNN4 478 aa12.34□□□□□ -0.43
SHMT1P1-201ENST00000419974 DOPEY1Q5JWR5 2465 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 ICE1Q9Y2F5 2266 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 NBPF19A0A087WUL8 3843 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 hCG_38984A0A1B0GV85 526 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 PDCD5O14737 125 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 CDRT1O95170 752 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 SLC2A1P11166 492 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 SOX6P35712 828 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 DDOSTP39656 456 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 RANBP1P43487 201 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 PPA1Q15181 289 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 TSC22D1Q15714 1073 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 TAB1Q15750 504 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 CEP78Q5JTW2 689 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 XKRXQ6PP77 449 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 FBXW12Q6X9E4 464 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 OR5D14Q8NGL3 314 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 MRI1Q9BV20 369 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 MMP27Q9H306 513 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 EIF3KQ9UBQ5 218 aaKnown RBP12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 CKLFQ9UBR5 152 aa12.33□□□□□ -0.44
SHMT1P1-201ENST00000419974 UTP20O75691 2785 aaKnown RBP12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 ADGRG4Q8IZF6 3080 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 CACNA1CQ13936 2221 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 IGHV1-18A0A0C4DH31 117 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 CYSRT1A8MQ03 144 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 NOTOA8MTQ0 251 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 CASKO14936 926 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 ALDOBP05062 364 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 CECR9P0C854 216 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 RAB3BP20337 219 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 ANOS1P23352 680 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 THBS4P35443 961 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 TGFBR1P36897 503 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 PEX19P40855 299 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 WNT5AP41221 380 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 SCAND1P57086 179 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 FAM3AP98173 230 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 MALLQ13021 153 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 FAM27D1Q5T7N8 215 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 TMEM42Q69YG0 159 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 ASPHD2Q6ICH7 369 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 NCCRP1Q6ZVX7 275 aaPredicted RBP12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 LRRTM1Q86UE6 522 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 LYPD6Q86Y78 171 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 NKAIN3Q8N8D7 197 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 OR13C3Q8NGS6 347 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 TSEN15Q8WW01 171 aaKnown RBP12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 ACOT12Q8WYK0 555 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 REEP6Q96HR9 211 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 TECTBQ96PL2 329 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 BCL2L14Q9BZR8 327 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 TCF7L1Q9HCS4 588 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms