RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 FOXG1P55316 489 aaPredicted RBP5.19□□□□□ -1.58
HMGB3-202ENST00000419110 CAV3P56539 151 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 SCAND1P57086 179 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 OR10A3P58181 314 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 RAB1AP62820 205 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 FOXF2Q12947 444 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 CNN3Q15417 329 aaKnown RBP5.19□□□□□ -1.58
HMGB3-202ENST00000419110 RAB11BQ15907 218 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 KRTAP27-1Q3LI81 207 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 C4orf17Q53FE4 359 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 UBE2NLQ5JXB2 153 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 C1QTNF12Q5T7M4 302 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 TMEM211Q6ICI0 200 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 C16orf87Q6PH81 154 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 UNQ9370/PRO34162Q6UXP9 181 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 UNQ6126/PRO20091Q6UXV3 157 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 STAC2Q6ZMT1 411 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 C3P1Q6ZMU1 363 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 BTLAQ7Z6A9 289 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 MRGPRGQ86SM5 289 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 MDP1Q86V88 176 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 LRRC28Q86X40 367 aaPredicted RBP5.19□□□□□ -1.58
HMGB3-202ENST00000419110 CXorf67Q86X51 503 aaPredicted RBP5.19□□□□□ -1.58
HMGB3-202ENST00000419110 GABRG1Q8N1C3 465 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 MFSD4AQ8N468 514 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 JAGN1Q8N5M9 183 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 PARP16Q8N5Y8 322 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 SAMD12Q8N8I0 201 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 PNLDC1Q8NA58 520 aaKnown RBP5.19□□□□□ -1.58
HMGB3-202ENST00000419110 SLC30A7Q8NEW0 376 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 OR6M1Q8NGM8 313 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 OR13C9Q8NGT0 318 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 ASB5Q8WWX0 329 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 PP6455Q8WZ26 134 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 SLC7A6Q92536 515 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 BCL2L2Q92843 193 aaPredicted RBP5.19□□□□□ -1.58
HMGB3-202ENST00000419110 ITFG2Q969R8 447 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 APOBEC3DQ96AK3 386 aaPredicted RBP5.19□□□□□ -1.58
HMGB3-202ENST00000419110 C10orf35Q96D05 121 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 TECTBQ96PL2 329 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 SLC30A2Q9BRI3 323 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 BARHL1Q9BZE3 327 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 CHST5Q9GZS9 411 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 OPN3Q9H1Y3 402 aaPredicted RBP5.19□□□□□ -1.58
HMGB3-202ENST00000419110 NOX3Q9HBY0 568 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF275Q9NSD4 429 aaPredicted RBP5.19□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF224Q9NZL3 707 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF835Q9Y2P0 537 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 AK6Q9Y3D8 172 aaKnown RBP5.19□□□□□ -1.58
HMGB3-202ENST00000419110 V9GY05 133 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 ATRXP46100 2492 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 TPRP12270 2363 aaKnown RBP5.19□□□□□ -1.58
HMGB3-202ENST00000419110 ATMQ13315 3056 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 PCNX1Q96RV3 2341 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 TRAV8-7A0A075B6U6 113 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 TRGV8A0A0C4DH27 118 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 hCG_38984A0A1B0GV85 526 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 LOC390937A0A1W2PQ73 354 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 OR5H1A6NKK0 313 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 IFITM5A6NNB3 132 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 E9PLN8 166 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 SLC17A2O00624 439 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 PIN1P1O15428 100 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 IGLV3-1P01715 115 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 APOA1P02647 267 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 CALCBP10092 127 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 EPXP11678 715 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 FAHP16930 419 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 ATF1P18846 271 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 PSMB1P20618 241 aaKnown RBP5.18□□□□□ -1.58
HMGB3-202ENST00000419110 BMP5P22003 454 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 AZGP1P25311 298 aaKnown RBP5.18□□□□□ -1.58
HMGB3-202ENST00000419110 CFPP27918 469 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 CD40LGP29965 261 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 ETV6P41212 452 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 CA7P43166 264 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF45Q02386 682 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 HGFACQ04756 655 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 GABRA6Q16445 453 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 SNAI3Q3KNW1 292 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 GLYATL3Q5SZD4 288 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 HES5Q5TA89 166 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 ZBTB37Q5TC79 503 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 CNIH2Q6PI25 160 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 C1orf229Q6ZS94 237 aaPredicted RBP5.18□□□□□ -1.58
HMGB3-202ENST00000419110 SEM1Q6ZVN7 128 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 RFPL4BQ6ZWI9 263 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 SSX8Q7RTT4 187 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 PRSS45Q7RTY3 260 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 LRRTM1Q86UE6 522 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 SERPINA12Q8IW75 414 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 RDH10Q8IZV5 341 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 RPRMLQ8N4K4 120 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 NAXEQ8NCW5 288 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 STEAP2Q8NFT2 490 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 SEMA6DQ8NFY4 1073 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 OR1M1Q8NGA1 313 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 OR5L1Q8NGL2 311 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 OR5D14Q8NGL3 314 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 OR2AE1Q8NHA4 323 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms