RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ACY3Q96HD9 319 aa10.15□□□□□ -0.79
PTCH1-205ENST00000418258 ADAT1Q9BUB4 502 aaKnown RBP10.15□□□□□ -0.79
PTCH1-205ENST00000418258 MRPL22Q9NWU5 206 aaKnown RBP10.15□□□□□ -0.79
PTCH1-205ENST00000418258 POMT2Q9UKY4 750 aa10.15□□□□□ -0.79
PTCH1-205ENST00000418258 STRAPQ9Y3F4 350 aaKnown RBP10.15□□□□□ -0.79
PTCH1-205ENST00000418258 RBP4P02753 201 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 MICBQ29980 383 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 SEC22CQ9BRL7 303 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 CDX4O14627 284 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-205ENST00000418258 RAF1P04049 648 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 EIF3IQ13347 325 aaKnown RBP10.14□□□□□ -0.79
PTCH1-205ENST00000418258 HAGHQ16775 308 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 WIPI1Q5MNZ9 446 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-205ENST00000418258 DHRS4L2Q6PKH6 230 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 ACTR3CQ9C0K3 210 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-205ENST00000418258 NME2P1O60361 137 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 ABCD3P28288 659 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 PIGAP37287 484 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 SOWAHCQ53LP3 525 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-205ENST00000418258 PRR27Q6MZM9 219 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 BTNL3Q6UXE8 466 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 ZFP62Q8NB50 900 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-205ENST00000418258 MISP3Q96FF7 219 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 PRRX2Q99811 253 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 UBTD1Q9HAC8 227 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 LAMP3Q9UQV4 416 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 MN1Q10571 1320 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-205ENST00000418258 DBX1A6NMT0 343 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 CEACAM16Q2WEN9 425 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 DMRTC1Q5HYR2 192 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 TMEM174Q8WUU8 243 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 MYOZ1Q9NP98 299 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-205ENST00000418258 MAGEB4O15481 346 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-205ENST00000418258 FABP7O15540 132 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 MT-CO3P00414 261 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 GPX2P18283 190 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 APEX1P27695 318 aaKnown RBP10.14□□□□□ -0.79
PTCH1-205ENST00000418258 PRDX4Q13162 271 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 OSR2Q8N2R0 312 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 CADM4Q8NFZ8 388 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 TMEM208Q9BTX3 173 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 TEX101Q9BY14 249 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 HEATR5BQ9P2D3 2071 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 TBX21Q9UL17 535 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 ANKUB1A6NFN9 424 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 SIX6O95475 246 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 CEACAM5P06731 702 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 TMEM108Q6UXF1 575 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 BCL7CQ8WUZ0 217 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-205ENST00000418258 GNRHR2Q96P88 292 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 SMOC1Q9H4F8 434 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 CLEC5AQ9NY25 188 aa10.14□□□□□ -0.79
PTCH1-205ENST00000418258 A0A1W2PR80 420 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 SPP1P10451 314 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 S100A11P31949 105 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 RAB1AP62820 205 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 TIGITQ495A1 244 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 FBXL6Q8N531 539 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 NOXO1Q8NFA2 376 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 RHOXF1Q8NHV9 184 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 OCEL1Q9H607 264 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 HRH1P35367 487 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 PIGPP57054 158 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 RELAQ04206 551 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 SSPNQ14714 243 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 CMC2Q9NRP2 79 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 C7orf72A4D263 438 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 TMEM268Q5VZI3 342 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 ARHGEF39Q8N4T4 335 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 DTWD2Q8NBA8 298 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 AAMDCQ9H7C9 122 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 HINT3Q9NQE9 182 aaKnown RBP10.13□□□□□ -0.79
PTCH1-205ENST00000418258 LINC01387J3KSC0 135 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 RTP5Q14D33 572 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 HES3Q5TGS1 186 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 CGB2Q6NT52 195 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-205ENST00000418258 APOBEC3DQ96AK3 386 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-205ENST00000418258 LRFN3Q9BTN0 628 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 PDFQ9HBH1 243 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 P4HTMQ9NXG6 502 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 PSENENQ9NZ42 101 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 ARPC4-TTLL3A0A0A6YYG9 625 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 LILRA5A6NI73 299 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 SHISA8B8ZZ34 492 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 NME1P15531 152 aaKnown RBP10.13□□□□□ -0.79
PTCH1-205ENST00000418258 FGF7P21781 194 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 DIO1P49895 249 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 FOXF1Q12946 379 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 BAMBIQ13145 260 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 RHOUQ7L0Q8 258 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 LFNGQ8NES3 379 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 SLC25A46Q96AG3 418 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 RPEQ96AT9 228 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 PLPPR2Q96GM1 343 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 NAA50Q9GZZ1 169 aaKnown RBP10.13□□□□□ -0.79
PTCH1-205ENST00000418258 TRA2AQ13595 282 aaKnown RBP eCLIP10.13□□□□□ -0.79
PTCH1-205ENST00000418258 PCNPQ8WW12 178 aaKnown RBP10.13□□□□□ -0.79
PTCH1-205ENST00000418258 SPTY2D1-AS1A0A0U1RR47 76 aa10.13□□□□□ -0.79
PTCH1-205ENST00000418258 M0R296 226 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms