RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SPAG7O75391 227 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 CD160O95971 181 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 IGKV2D-28P01615 120 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 IGHV2-5P01817 119 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 BGLAPP02818 100 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 IVLP07476 585 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 CSF3P09919 207 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 MLNP12872 115 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 HMGA1P17096 107 aaKnown RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 IGFBP3P17936 291 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 RPA3P35244 121 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 ATP5OP48047 213 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 AIF1P55008 147 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 TPI1P60174 286 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 YWHAGP61981 247 aaKnown RBP eCLIP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 BASP1P80723 227 aaKnown RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 DEFB103AP81534 67 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 HMGCS1Q01581 520 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 MRPL28Q13084 256 aaKnown RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 ITIH4Q14624 930 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 PTGES3Q15185 160 aaKnown RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 DEFB115Q30KQ5 88 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 BRMS1LQ5PSV4 323 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 SLC8B1Q6J4K2 584 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 LCN12Q6JVE5 192 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 H2BFWTQ7Z2G1 175 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 TMCO2Q7Z6W1 182 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 TMEM135Q86UB9 458 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 THOC6Q86W42 341 aaKnown RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 CNPY4Q8N129 248 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZCCHC7Q8N3Z6 543 aaKnown RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 TPRX1Q8N7U7 411 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 Q8N976 141 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 FAM110BQ8TC76 370 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 STARD8Q92502 1023 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 CHMP6Q96FZ7 201 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 TSNARE1Q96NA8 513 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 MS4A4EQ96PG1 132 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 TGS1Q96RS0 853 aaKnown RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 TRIB3Q96RU7 358 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 CNN2Q99439 309 aaKnown RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 SORT1Q99523 831 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 EBNA1BP2Q99848 306 aaKnown RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 TRIM62Q9BVG3 475 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 C20orf27Q9GZN8 174 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 MFFQ9GZY8 342 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 IFI27L2Q9H2X8 130 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 CENPHQ9H3R5 247 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 TRABDQ9H4I3 376 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 ANKRD19PQ9H560 264 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 VPS37BQ9H9H4 285 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 SLCO1B3Q9NPD5 702 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 ADAP2Q9NPF8 381 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 TREX1Q9NSU2 369 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 NECAP2Q9NVZ3 263 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 DDIT4Q9NX09 232 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 HEY1Q9Y5J3 304 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 F11RQ9Y624 299 aaKnown RBP2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 CENPFP49454 3210 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 ANKRD12Q6UB98 2062 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 EML5Q05BV3 1969 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 DOCK9Q9BZ29 2069 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 SYNJ2BP-COX16A0A087WUM0 186 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 PRSS37A4D1T9 235 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 LRCOL1A6NCL2 159 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 GOLGA6L10A6NI86 522 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 C11orf94C9JXX5 98 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 XKRYO14609 159 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 MED6O75586 246 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 RETP07949 1114 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 CCL5P13501 91 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZNF30P17039 623 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 PGAM1P18669 254 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 CA5AP35218 305 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 HSD17B2P37059 387 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 GPR6P46095 362 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 SUB1P53999 127 aaKnown RBP eCLIP2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 PRMT2P55345 433 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZNF33AQ06730 810 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 IFFO1Q0D2I5 559 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 SMARCB1Q12824 385 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 DNAJC3Q13217 504 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 PSMD5Q16401 504 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 LRRC26Q2I0M4 334 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 DEFB116Q30KQ4 102 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 TRIM40Q6P9F5 258 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 CMC1Q7Z7K0 106 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 CROCCP2Q86T23 111 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZNF679Q8IYX0 411 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 UMODL1-AS1Q8N2C9 162 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZNF557Q8N988 423 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 OR52K1Q8NGK4 314 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 WFDC5Q8TCV5 224 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 TCP10LQ8TDR4 215 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 LRRC39Q96DD0 335 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 IMP4Q96G21 291 aaKnown RBP2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 CERS2Q96G23 380 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 GLT1D1Q96MS3 346 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 OR8B4Q96RC9 309 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms