RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 HLA-DOBP13765 273 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 NME2P22392 152 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 PRSS3P35030 304 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 GLP1RP43220 463 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 TCF15Q12870 199 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 NKPD1Q17RQ9 610 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 SLC25A30Q5SVS4 291 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 METTL11BQ5VVY1 283 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF767PQ75MW2 155 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 ASCL5Q7RTU5 278 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 GALNT11Q8NCW6 608 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 SCGB1C1Q8TD33 95 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 TSSK2Q96PF2 358 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 ALKBH3Q96Q83 286 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-211ENST00000413186 TP63Q9H3D4 680 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-211ENST00000413186 NELFAQ9H3P2 528 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 U3KQA8 63 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 SCN2AQ99250 2005 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 CEP250Q9BV73 2442 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 M0R135 149 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 TIMM8AO60220 97 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-211ENST00000413186 BGLAPP02818 100 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 OPRM1P35372 400 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 RPS25P62851 125 aaKnown RBP7.61□□□□□ -1.19
SYNE1-211ENST00000413186 LCN10Q6JVE6 187 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 DOK3Q7L591 496 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 OR2D3Q8NGH3 330 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 PIGCQ92535 297 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF799Q96GE5 643 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 NOL4LQ96MY1 436 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-211ENST00000413186 SORCS2Q96PQ0 1159 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 USB1Q9BQ65 265 aaKnown RBP7.61□□□□□ -1.19
SYNE1-211ENST00000413186 OR51B6Q9H340 312 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 CRLF2Q9HC73 371 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 LOC102723971A0A1B0GUV8 181 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 SLC22A23A1A5C7 686 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 AHRRA9YTQ3 701 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 CDC42EP2O14613 210 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 SLC31A2O15432 143 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 XRCC2O43543 280 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 WDR1O75083 606 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 ONECUT2O95948 504 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 TTRP02766 147 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 FCER2P06734 321 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 SPINK2P20155 84 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 EPHA2P29317 976 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 PSMA6P60900 246 aaKnown RBP7.61□□□□□ -1.19
SYNE1-211ENST00000413186 UBE2NLQ5JXB2 153 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 ATP1A1-AS1Q5TC04 95 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 XAF1Q6GPH4 301 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 DESI1Q6ICB0 168 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 DEGS2Q6QHC5 323 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 PIP4P1Q86T03 277 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 C1orf87Q8N0U7 546 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 FDCSPQ8NFU4 85 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 FNDC9Q8TBE3 224 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 RNF32Q9H0A6 362 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 ZC3H12DA2A288 527 aaKnown RBP7.6□□□□□ -1.19
SYNE1-211ENST00000413186 GCM2O75603 506 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-211ENST00000413186 CX3CR1P49238 355 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 MOB3CQ70IA8 216 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 HIST2H3AQ71DI3 136 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 SSX8Q7RTT4 187 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 CUL9Q8IWT3 2517 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 ASCC1Q8N9N2 400 aaKnown RBP7.6□□□□□ -1.19
SYNE1-211ENST00000413186 OR11L1Q8NGX0 322 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 ANGPTL6Q8NI99 470 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 TMEM106AQ96A25 262 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 RAB9BQ9NP90 201 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 A0A1W2PQ09 198 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 NPIPB9F8W1W9 429 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 PHOX2AO14813 284 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 B4GALT1P15291 398 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 USF1P22415 310 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-211ENST00000413186 ZP4Q12836 540 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 ELFN2Q5R3F8 820 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 DBX2Q6ZNG2 339 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 STEAP2Q8NFT2 490 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 ABHD5Q8WTS1 349 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 TSPAN32Q96QS1 320 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 GCM1Q9NP62 436 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 SMCO4Q9NRQ5 59 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 RBFOX1Q9NWB1 397 aaKnown RBP7.6□□□□□ -1.19
SYNE1-211ENST00000413186 NLKQ9UBE8 527 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 NEUROG3Q9Y4Z2 214 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 MYLKQ15746 1914 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 DOCK9Q9BZ29 2069 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 ZFHX2Q9C0A1 2572 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-211ENST00000413186 OOEPA6NGQ2 149 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 M0R233 179 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 SHOXO15266 292 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 AGTR1P30556 359 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 CTF1Q16619 201 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 C1QL3Q5VWW1 255 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 CORO6Q6QEF8 472 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 THSD4Q6ZMP0 1018 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF573Q86YE8 665 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 C11orf42Q8N5U0 333 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 RELL2Q8NC24 303 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-211ENST00000413186 NPRL2Q8WTW4 380 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms