RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 LOC102724200A0A096LPH7 203 aaPredicted RBP-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 BTBD17A6NE02 478 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 G3V3Q6 166 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 M0R1X1 148 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 TIMM8AO60220 97 aaPredicted RBP-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 RAB36O95755 333 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 ATP6V1E1P36543 226 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 MRPS22P82650 360 aaKnown RBP-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 CHIT1Q13231 466 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 C1orf185Q5T7R7 199 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 NPSR1Q6W5P4 371 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 PAGE2Q7Z2X7 111 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 Q8NAQ8 132 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 OR52E2Q8NGJ4 325 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 OR2A1Q8NGT9 310 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 OR10G6Q8NH81 332 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 LMX1AQ8TE12 382 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 RAB33BQ9H082 229 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 TUBA4BQ9H853 241 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 MED4Q9NPJ6 270 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 OR2S2Q9NQN1 319 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 RBFOX1Q9NWB1 397 aaKnown RBP-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 NUP50Q9UKX7 468 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 OR51B4Q9Y5P0 310 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 SLC22A7Q9Y694 548 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 FRAS1Q86XX4 4008 aa-0.12□□□□□ -2.43
RNU2-55P-201ENST00000411146 APCP25054 2843 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 A0A1B0GWJ7 208 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 MYBPHLA2RUH7 354 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 GOLGA6L4A6NEF3 574 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 SNTNA6NMZ2 147 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 A8MWL6 223 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 SMKR1H3BMG3 65 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 K7EQM0 130 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 CDC7O00311 574 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 CHMP2AO43633 222 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 KLHL41O60662 606 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 SNNO75324 88 aaPredicted RBP-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 GATBO75879 557 aaKnown RBP-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 SCGNO76038 276 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 TSPAN13O95857 204 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 TRGV3P03979 118 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 ZNF22P17026 224 aaPredicted RBP-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 ZNF43P17038 809 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 IL10P22301 178 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 APLNRP35414 380 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 CCNHP51946 323 aaPredicted RBP-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 CTAG1AP78358 180 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 CYHR1Q6ZMK1 362 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 MBOAT1Q6ZNC8 495 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 MRPL55Q7Z7F7 128 aaKnown RBP-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 SLC25A29Q8N8R3 303 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 FAM83FQ8NEG4 500 aaPredicted RBP-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 STEAP2Q8NFT2 490 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 RXFP4Q8TDU9 374 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 TMEM230Q96A57 120 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 EEF1AKMT3Q96AZ1 226 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 S100PBPQ96BU1 408 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 DTNBP1Q96EV8 351 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 RPRD1AQ96P16 312 aaPredicted RBP-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 ATP5SQ99766 215 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 TMEM43Q9BTV4 400 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 MRPL32Q9BYC8 188 aaKnown RBP-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 SND1-IT1Q9HBX3 110 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 FAM60AQ9NP50 221 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 FARSBQ9NSD9 589 aaKnown RBP-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 PEX16Q9Y5Y5 336 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 ICOSQ9Y6W8 199 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 MIA3Q5JRA6 1907 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 FHOD3Q2V2M9 1422 aa-0.13□□□□□ -2.43
RNU2-55P-201ENST00000411146 A0A1B0GU33 70 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 XKRY2A2RUG3 117 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 ISPDA4D126 451 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 GOLGA8SH3BPF8 625 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 PALMO75781 387 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 ZNF189O75820 626 aaPredicted RBP-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 SCO1O75880 301 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 FLOT1O75955 427 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 HSPD1P10809 573 aaKnown RBP-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 SLC1A2P43004 574 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 SEMG2Q02383 582 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 FGL1Q08830 312 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 EXOC3L2Q2M3D2 409 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 XKR7Q5GH72 579 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 RIPPLY2Q5TAB7 128 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 FAM104BQ5XKR9 115 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 KDM4DQ6B0I6 523 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 H2BFWTQ7Z2G1 175 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 EFL1Q7Z2Z2 1120 aaKnown RBP-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 TMEM150AQ86TG1 271 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 CDR2LQ86X02 465 aaPredicted RBP-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 FAM71AQ8IYT1 594 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 PIBF1Q8WXW3 757 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 STMN2Q93045 179 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 DERL3Q96Q80 235 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 TPPP3Q9BW30 176 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 HIGD2AQ9BW72 106 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 ANKRD60Q9BZ19 345 aa-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 MRPL16Q9NX20 251 aaKnown RBP-0.14□□□□□ -2.43
RNU2-55P-201ENST00000411146 TAS2R3Q9NYW6 316 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms