RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 EXTL1Q92935 676 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 FAM181BA6NEQ2 426 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 EIF3FO00303 357 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-203ENST00000409672 KRASP01116 189 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 HLA-HP01893 362 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 CD3EP07766 207 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 MGPP08493 103 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 M1APQ8TC57 530 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 IL22RA2Q969J5 263 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 TAF9BQ9HBM6 251 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 OR1A1Q9P1Q5 309 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 FAHP16930 419 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 POLR2IP36954 125 aaKnown RBP7.61□□□□□ -1.19
SCN9A-203ENST00000409672 TCTN1Q2MV58 587 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 TMEM196Q5HYL7 178 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 LRRC28Q86X40 367 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-203ENST00000409672 LGI3Q8N145 548 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 SPEM1Q8N4L4 309 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 GDPD1Q8N9F7 314 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 GFRA3O60609 400 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 PRF1P14222 555 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 LYZP61626 148 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 RBMS2Q15434 407 aaKnown RBP7.61□□□□□ -1.19
SCN9A-203ENST00000409672 OR51S1Q8NGJ8 323 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 SEC22CQ9BRL7 303 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 SRRQ9GZT4 340 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 TMEM231Q9H6L2 316 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 C20orf141Q9NUB4 165 aa7.61□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF230Q9UIE0 474 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-203ENST00000409672 MRPS18BQ9Y676 258 aaKnown RBP7.61□□□□□ -1.19
SCN9A-203ENST00000409672 CTSLP07711 333 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 BMI1P35226 326 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 CEACAM6P40199 344 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 FOXF1Q12946 379 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 MDGA2Q7Z553 956 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 AAMDCQ9H7C9 122 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 MOKQ9UQ07 419 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 ST3GAL6Q9Y274 331 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 PLRG1O43660 514 aaKnown RBP7.6□□□□□ -1.19
SCN9A-203ENST00000409672 ARG1P05089 322 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 FCGR2CP31995 323 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 OR10K2Q6IF99 312 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 OR52H1Q8NGJ2 320 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 CTDSP1Q9GZU7 261 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 KCNIP2Q9NS61 270 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 TREX1Q9NSU2 369 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 COL16A1Q07092 1604 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-203ENST00000409672 LSRQ86X29 649 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-203ENST00000409672 PSENENQ9NZ42 101 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 IL37Q9NZH6 218 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 ADAM20O43506 726 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 FCGR3BO75015 233 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 NKX2-1P43699 371 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-203ENST00000409672 TMEM81Q6P7N7 255 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 OR2V1Q8NHB1 315 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 TMUB1Q9BVT8 246 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 AK3Q9UIJ7 227 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 RAB22AQ9UL26 194 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 CHST2Q9Y4C5 530 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 TRAV17A0A0B4J275 112 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 IGHV5-51A0A0C4DH38 117 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 TMEM52BQ4KMG9 183 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 AGBL4Q5VU57 503 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 RBPMS2Q6ZRY4 209 aaKnown RBP7.6□□□□□ -1.19
SCN9A-203ENST00000409672 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.6□□□□□ -1.19
SCN9A-203ENST00000409672 OR1L3Q8NH93 324 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 APOBEC4Q8WW27 367 aaKnown RBP7.6□□□□□ -1.19
SCN9A-203ENST00000409672 FBXO8Q9NRD0 319 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 HSD17B1P14061 328 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF91Q05481 1191 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 SFXN4Q6P4A7 337 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 RNF113BQ8IZP6 322 aaKnown RBP7.6□□□□□ -1.19
SCN9A-203ENST00000409672 CT55Q8WUE5 264 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 OPALINQ96PE5 141 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 C12orf10Q9HB07 376 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 UBBP0CG47 229 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 BSGP35613 385 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 LGALS7P47929 136 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF420Q8TAQ5 688 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-203ENST00000409672 MS4A6EQ96DS6 147 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 RASL11BQ9BPW5 248 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 LOC107986453A0A1B0GWG9 222 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 SOD1P00441 154 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 ABCD3P28288 659 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 RPL18Q07020 188 aaKnown RBP7.6□□□□□ -1.19
SCN9A-203ENST00000409672 SMIM21Q3B7S5 101 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF793Q6ZN11 406 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 ARL6IP6Q8N6S5 226 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 TM4SF19Q96DZ7 209 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 OR52A5Q9H2C5 316 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 MYOZ1Q9NP98 299 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-203ENST00000409672 OCIAD1Q9NX40 245 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 CSAG2Q9Y5P2 127 aa7.6□□□□□ -1.19
SCN9A-203ENST00000409672 TNFSF8P32971 234 aa7.59□□□□□ -1.19
SCN9A-203ENST00000409672 EMX1Q04741 257 aaPredicted RBP7.59□□□□□ -1.19
SCN9A-203ENST00000409672 KIAA0141Q14154 515 aaPredicted RBP7.59□□□□□ -1.19
SCN9A-203ENST00000409672 TNXAQ16473 311 aa7.59□□□□□ -1.19
SCN9A-203ENST00000409672 ACTBL2Q562R1 376 aa7.59□□□□□ -1.19
SCN9A-203ENST00000409672 PARP16Q8N5Y8 322 aa7.59□□□□□ -1.19
SCN9A-203ENST00000409672 OR10R2Q8NGX6 335 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms