RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 BDKRB2P30411 391 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 IL18Q14116 193 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 RAB11BQ15907 218 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 EIF2S3LQ2VIR3 472 aaKnown RBP12.21□□□□□ -0.45
GPNMB-203ENST00000409458 UBE2NLQ5JXB2 153 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 GLT8D1Q68CQ7 371 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 FAM166AQ6J272 317 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 LYPD6Q86Y78 171 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 DOLPP1Q86YN1 238 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 NKAIN3Q8N8D7 197 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 OR5D14Q8NGL3 314 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 SLC25A38Q96DW6 304 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 MS4A3Q96HJ5 214 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 POM121L2Q96KW2 1035 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 ZNF75AQ96N20 296 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 CCDC32Q9BV29 185 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 TP63Q9H3D4 680 aaPredicted RBP12.21□□□□□ -0.45
GPNMB-203ENST00000409458 PRORYQ9H606 182 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 SP140LQ9H930 580 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 RHBDD3Q9Y3P4 386 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 RTTNQ86VV8 2226 aa12.21□□□□□ -0.45
GPNMB-203ENST00000409458 INTS1Q8N201 2190 aaKnown RBP12.2□□□□□ -0.46
GPNMB-203ENST00000409458 PIEZO2Q9H5I5 2752 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 LOC390937A0A1W2PQ73 354 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 CIB4A0PJX0 185 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 MEGF11A6BM72 1044 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 PRRG2O14669 202 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 APOA1P02647 267 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 GLI4P10075 376 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 CD37P11049 281 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 FAHP16930 419 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 RAB3AP20336 220 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 PRSS12P56730 875 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 PLP2Q04941 152 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 PLA2G7Q13093 441 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 ZNF181Q2M3W8 571 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 STEAP3Q658P3 488 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 XKRXQ6PP77 449 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 METAP1DQ6UB28 335 aaPredicted RBP12.2□□□□□ -0.46
GPNMB-203ENST00000409458 COLCA1Q6ZS62 124 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 CXorf67Q86X51 503 aaPredicted RBP12.2□□□□□ -0.46
GPNMB-203ENST00000409458 LYSMD2Q8IV50 215 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 OR5AS1Q8N127 324 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 JAGN1Q8N5M9 183 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 OR52N4Q8NGI2 321 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 ZFP3Q96NJ6 502 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 MRI1Q9BV20 369 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 KCNK15Q9H427 330 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 PPP1R3EQ9H7J1 279 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 TMEM138Q9NPI0 162 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 C14orf119Q9NWQ9 140 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 PIGLQ9Y2B2 252 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 ZNF835Q9Y2P0 537 aa12.2□□□□□ -0.46
GPNMB-203ENST00000409458 hCG_38984A0A1B0GV85 526 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 SULT1B1O43704 296 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 MTRF1O75570 445 aaKnown RBP12.19□□□□□ -0.46
GPNMB-203ENST00000409458 HOXD4P09016 255 aaPredicted RBP12.19□□□□□ -0.46
GPNMB-203ENST00000409458 ACKR3P25106 362 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 CEACAM8P31997 349 aaPredicted RBP12.19□□□□□ -0.46
GPNMB-203ENST00000409458 THBS4P35443 961 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 ZNF92Q03936 586 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 TNK1Q13470 666 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 BAK1Q16611 211 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 PYDC2Q56P42 97 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 PGAP1Q75T13 922 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 MYPOPQ86VE0 399 aaPredicted RBP12.19□□□□□ -0.46
GPNMB-203ENST00000409458 CCDC54Q8NEL0 328 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 C1orf162Q8NEQ5 155 aaPredicted RBP12.19□□□□□ -0.46
GPNMB-203ENST00000409458 OR51D1Q8NGF3 324 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 SLC25A28Q96A46 364 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 TINAGQ9UJW2 476 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 ETV7Q9Y603 341 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 ZZEF1O43149 2961 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 IGKV1-9A0A0C4DH69 117 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 A0A0G2JMP0 313 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 A0A0X1KG70 313 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 A0A1B0GVG6 124 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 CELA3BP08861 270 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 HTR2CP28335 458 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 APLNRP35414 380 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 TALDO1P37837 337 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 UBE2NP61088 152 aaKnown RBP12.19□□□□□ -0.46
GPNMB-203ENST00000409458 KLRB1Q12918 225 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 RNF144BQ7Z419 303 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 CMTM4Q8IZR5 234 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 OR8H2Q8N162 312 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 PAQR4Q8N4S7 273 aaPredicted RBP12.19□□□□□ -0.46
GPNMB-203ENST00000409458 SEMA6DQ8NFY4 1073 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 OR4M2Q8NGB6 313 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 OR6M1Q8NGM8 313 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 BOD1Q96IK1 185 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 CMTM3Q96MX0 182 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 SFXN3Q9BWM7 321 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 CHST5Q9GZS9 411 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 RGCCQ9H4X1 137 aa12.19□□□□□ -0.46
GPNMB-203ENST00000409458 METTL17Q9H7H0 456 aaPredicted RBP12.19□□□□□ -0.46
GPNMB-203ENST00000409458 XRCC2O43543 280 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 SERPINA5P05154 406 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 IL7P13232 177 aa12.18□□□□□ -0.46
GPNMB-203ENST00000409458 ZNF14P17017 642 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms