RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 UFSP2Q9NUQ7 469 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 RCC2Q9P258 522 aaKnown RBP11.59□□□□□ -0.55
PTPRN-202ENST00000409251 PILRAQ9UKJ1 303 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 KCNK7Q9Y2U2 307 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 P2RY10O00398 339 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 PHOX2AO14813 284 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 ZNF217O75362 1048 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 GLP1RP43220 463 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 ZP2Q05996 745 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 OR13C8Q8NGS7 320 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 MAFAQ8NHW3 353 aaPredicted RBP11.59□□□□□ -0.55
PTPRN-202ENST00000409251 BSCL2Q96G97 398 aaPredicted RBP11.59□□□□□ -0.55
PTPRN-202ENST00000409251 ADAM29Q9UKF5 820 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 ETV7Q9Y603 341 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 MRPS18BQ9Y676 258 aaKnown RBP11.59□□□□□ -0.55
PTPRN-202ENST00000409251 ZFHX2Q9C0A1 2572 aaPredicted RBP11.59□□□□□ -0.55
PTPRN-202ENST00000409251 ESPL1Q14674 2120 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 TEX13DA0A0J9YY54 714 aaPredicted RBP11.59□□□□□ -0.55
PTPRN-202ENST00000409251 C2orf72A6NCS6 295 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 ZNF878C9JN71 531 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 TGFBR3LH3BV60 316 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 BCAT2O15382 392 aaPredicted RBP11.59□□□□□ -0.55
PTPRN-202ENST00000409251 RENP00797 406 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 C1QL3Q5VWW1 255 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 UQCC3Q6UW78 93 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 CA13Q8N1Q1 262 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 TOMM40LQ969M1 308 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 SGK3Q96BR1 496 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 SEC11CQ9BY50 192 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 MMP26Q9NRE1 261 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 CHRNA9Q9UGM1 479 aa11.59□□□□□ -0.55
PTPRN-202ENST00000409251 GPR75O95800 540 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 FABP4P15090 132 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 IKZF1Q13422 519 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 RNF212Q495C1 297 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 ZNF343Q6P1L6 599 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 PGAP1Q75T13 922 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 GKN2Q86XP6 184 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 CDRT4Q8N9R6 151 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 SLC25A43Q8WUT9 341 aaPredicted RBP11.58□□□□□ -0.56
PTPRN-202ENST00000409251 LPAR3Q9UBY5 353 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 A0A0B4J2E0 115 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 A0A1B0GX12 115 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 GPR37O15354 613 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 DIRAS3O95661 229 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 CRHP06850 196 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 NDUFB7P17568 137 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 RAB5AP20339 215 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 ZNF84P51523 738 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 OR4K15Q8NH41 348 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 LURAP1Q96LR2 239 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 S100A13Q99584 98 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 PRTFDC1Q9NRG1 225 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 GFOD1Q9NXC2 390 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 LOC400499M0QZD8 3231 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 AGR2O95994 175 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 ALOX5APP20292 161 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 GSK3AP49840 483 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 AWAT2Q6E213 333 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 ZNF550Q7Z398 422 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 FAM213BQ8TBF2 198 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 ATG101Q9BSB4 218 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 PARPBPQ9NWS1 579 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 ENTPD2Q9Y5L3 495 aa11.58□□□□□ -0.56
PTPRN-202ENST00000409251 DIDO1Q9BTC0 2240 aaKnown RBP11.58□□□□□ -0.56
PTPRN-202ENST00000409251 STMND1H3BQB6 276 aa11.57□□□□□ -0.56
PTPRN-202ENST00000409251 PNPP00491 289 aa11.57□□□□□ -0.56
PTPRN-202ENST00000409251 S1PR1P21453 382 aa11.57□□□□□ -0.56
PTPRN-202ENST00000409251 HNRNPKP61978 463 aaKnown RBP eCLIP11.57□□□□□ -0.56
PTPRN-202ENST00000409251 GFI1BQ5VTD9 330 aa11.57□□□□□ -0.56
PTPRN-202ENST00000409251 CBLN3Q6UW01 205 aa11.57□□□□□ -0.56
PTPRN-202ENST00000409251 DMRTC2Q8IXT2 367 aaPredicted RBP11.57□□□□□ -0.56
PTPRN-202ENST00000409251 FGGYQ96C11 551 aa11.57□□□□□ -0.56
PTPRN-202ENST00000409251 PRRT1Q99946 306 aa11.57□□□□□ -0.56
PTPRN-202ENST00000409251 PDE7BQ9NP56 450 aa11.57□□□□□ -0.56
PTPRN-202ENST00000409251 OR4C45A6NMZ5 311 aa11.57□□□□□ -0.56
PTPRN-202ENST00000409251 OR2C1O95371 312 aa11.57□□□□□ -0.56
PTPRN-202ENST00000409251 ARRB1P49407 418 aaPredicted RBP11.57□□□□□ -0.56
PTPRN-202ENST00000409251 PRSS35Q8N3Z0 413 aa11.57□□□□□ -0.56
PTPRN-202ENST00000409251 B3GALT1Q9Y5Z6 326 aa11.57□□□□□ -0.56
PTPRN-202ENST00000409251 H0YIZ8 118 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 HCRTR2O43614 444 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 NSA2O95478 260 aaKnown RBP11.56□□□□□ -0.56
PTPRN-202ENST00000409251 ITGB2P05107 769 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 FOLR1P15328 257 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 GPX4P36969 197 aaPredicted RBP11.56□□□□□ -0.56
PTPRN-202ENST00000409251 MFGE8Q08431 387 aaPredicted RBP11.56□□□□□ -0.56
PTPRN-202ENST00000409251 HAGHQ16775 308 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 IAH1Q2TAA2 248 aaPredicted RBP11.56□□□□□ -0.56
PTPRN-202ENST00000409251 SLC25A45Q8N413 288 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 PNLDC1Q8NA58 520 aaKnown RBP11.56□□□□□ -0.56
PTPRN-202ENST00000409251 GPR61Q9BZJ8 451 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 THADAQ6YHU6 1953 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 CYR61O00622 381 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 AHSA1O95433 338 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 OR8U8P0C7N1 319 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 GLRA1P23415 457 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 CXCR1P25024 350 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 CHAF1BQ13112 559 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 MPPED2Q15777 294 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms