RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 CT45A9P0DMV2 189 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 CHATP28329 748 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 CT45A2Q5DJT8 189 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 DRAM2Q6UX65 266 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 MAMSTRQ6ZN01 415 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 SLC25A26Q70HW3 274 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 BATF2Q8N1L9 274 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR51A4Q8NGJ6 313 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR1F12Q8NHA8 337 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 MSI2Q96DH6 328 aaKnown RBP12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 TM4SF19Q96DZ7 209 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 C10orf90Q96M02 699 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 TRIB1Q96RU8 372 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 C1QTNF6Q9BXI9 259 aa12.76□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR2F2O95006 317 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 EPPINO95925 133 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 HRH1P35367 487 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR2F1Q13607 317 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 DMKNQ6E0U4 476 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 PXT1Q8NFP0 134 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR2Y1Q8NGV0 311 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 PTP4A1Q93096 173 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 UBL7Q96S82 380 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 HS3ST1O14792 307 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 HBE1P02100 147 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 FZD5Q13467 585 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 PNLIPRP3Q17RR3 467 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZDHHC23Q8IYP9 409 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 TEX19Q8NA77 164 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 SPSB1Q96BD6 273 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 SDSLQ96GA7 329 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 PTDSS2Q9BVG9 487 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 EDARQ9UNE0 448 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 PROCRQ9UNN8 238 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 FIGNL2A6NMB9 653 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 SERPINE3A8MV23 424 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 TNFSF12O43508 249 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR5H8P0DN80 308 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 SPNP16150 400 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 NME2P22392 152 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 SNCAP37840 140 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 EIF2S3P41091 472 aaKnown RBP12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 SRSF5Q13243 272 aaKnown RBP12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 CKAP5Q14008 2032 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 IRF3Q14653 427 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 COL13A1Q5TAT6 717 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 WDSUB1Q8N9V3 476 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 PTPMT1Q8WUK0 201 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 RDH5Q92781 318 aa12.75□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZNF732B4DXR9 585 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 NUPL2O15504 423 aaKnown RBP12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 CLDN1O95832 211 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 C1QCP02747 245 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 CNR1P21554 472 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 SRD5A2P31213 254 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 TAS2R30P59541 319 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 RAB35Q15286 201 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 LINC00303Q3SY05 128 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 SHEQ5VZ18 495 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZNF687Q8N1G0 1237 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 TMEM229BQ8NBD8 167 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 RASL10BQ96S79 203 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 EFSO43281 561 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 CRYAAP02489 173 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 EDDM3AQ14507 147 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 SFTPA2Q8IWL1 248 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 HSD17B11Q8NBQ5 300 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 FAM213BQ8TBF2 198 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 APOBEC3DQ96AK3 386 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 NEURL2Q9BR09 285 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 UQCC2Q9BRT2 126 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 ST3GAL6Q9Y274 331 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 PSMB6P28072 239 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 FUT6P51993 359 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZNF85Q03923 595 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 DEFB109BQ30KR1 87 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 GLCCI1Q86VQ1 547 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 NPEPL1Q8NDH3 523 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 MARCH1Q8TCQ1 289 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 TECTBQ96PL2 329 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 PCYT1BQ9Y5K3 369 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 FLVCR1Q9Y5Y0 555 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 CACNA1IQ9P0X4 2223 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 RER1O15258 196 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 GPANK1O95872 356 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 SERPINF1P36955 418 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 LSM11P83369 360 aaKnown RBP eCLIP12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 CLINT1Q14677 625 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 SUMF1Q8NBK3 374 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 MCHR2Q969V1 340 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 PLK3Q9H4B4 646 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 OPA3Q9H6K4 179 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 PLEKHB1Q9UF11 243 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZNF391Q9UJN7 358 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 WDR90Q96KV7 1748 aa12.74□□□□□ -0.37
PCDHGA11-201ENST00000398587 TRGV5A0A0B4J1U4 118 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 TRAV17A0A0B4J275 112 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR5H14A6NHG9 310 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 LRRC30A6NM36 301 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 OGG1O15527 345 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms