RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 GABRR1P24046 479 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 PLGLB1Q02325 96 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ELAVL1Q15717 326 aaKnown RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF674Q2M3X9 581 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ARSKQ6UWY0 536 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ANKRD37Q7Z713 158 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ADGRE4PQ86SQ3 457 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM200AQ86VY9 491 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 PAQR8Q8TEZ7 354 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 OR6C1Q96RD1 312 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF251Q9BRH9 671 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 PKIBQ9C010 78 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM231Q9H6L2 316 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 MRPS18BQ9Y676 258 aaKnown RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 SMCHD1A6NHR9 2005 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 BCAT2O15382 392 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TXNL1O43396 289 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TOX4O94842 621 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ACSM4P0C7M7 580 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM225BP0DP42 221 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 NPY4RP50391 375 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 PNLIPRP2P54317 469 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ACY1Q03154 408 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM81Q6P7N7 255 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 UNQ6126/PRO20091Q6UXV3 157 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM156Q8N614 296 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 EID2Q8N6I1 236 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 STOML3Q8TAV4 291 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 HPSE2Q8WWQ2 592 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 TCEAL3Q969E4 200 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 ZC3H10Q96K80 434 aaKnown RBP4.42□□□□□ -1.7
SMAD4-202ENST00000398417 SUSD2Q9UGT4 822 aa4.42□□□□□ -1.7
SMAD4-202ENST00000398417 APC2O95996 2303 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 BRWD1Q9NSI6 2320 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 SLC22A23A1A5C7 686 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 HAX1O00165 279 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 SDCBPO00560 298 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF354AO60765 605 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-202ENST00000398417 PMS2P2O95744 297 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 WDPCPO95876 746 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 CLPSP04118 112 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 CD1AP06126 327 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 CD96P40200 585 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 GLO1Q04760 184 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 C9orf135Q5VTT2 229 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 C12orf54Q6X4T0 127 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 PXT1Q8NFP0 134 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 OR2I1PQ8NGU4 316 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 MARCH1Q8TCQ1 289 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 TOMM40LQ969M1 308 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 PTGES2Q9H7Z7 377 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 GGT3PA6NGU5 568 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 PRR19A6NJB7 356 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 NPIPB9F8W1W9 429 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 AGPAT2O15120 278 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 NME2P22392 152 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 SERPINF1P36955 418 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 H3F3AP84243 136 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 EGR3Q06889 387 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 PDCD1Q15116 288 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 MOB3CQ70IA8 216 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 GTPBP8Q8N3Z3 284 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-202ENST00000398417 LRRC18Q8N456 261 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 OR5H2Q8NGV7 314 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 FOXRED1Q96CU9 486 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-202ENST00000398417 SOX7Q9BT81 388 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 VN1R1Q9GZP7 353 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 KCNJ16Q9NPI9 418 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 EXOSC3Q9NQT5 275 aaKnown RBP4.41□□□□□ -1.7
SMAD4-202ENST00000398417 SERTAD4Q9NUC0 356 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 KLK13Q9UKR3 277 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 NUP50Q9UKX7 468 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 FOCADQ5VW36 1801 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 EML6Q6ZMW3 1958 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 RBBP6Q7Z6E9 1792 aaKnown RBP4.41□□□□□ -1.7
SMAD4-202ENST00000398417 IGLV1-36A0A0B4J1U3 117 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 A0A1B0GX78 115 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 PLPP3O14495 311 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 LPAL2Q16609 132 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 RSPO4Q2I0M5 234 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-202ENST00000398417 CLEC9AQ6UXN8 241 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 SEH1LQ96EE3 360 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 PSMG3Q9BT73 122 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-202ENST00000398417 RBM24Q9BX46 236 aaKnown RBP4.41□□□□□ -1.7
SMAD4-202ENST00000398417 IGKV1D-43A0A0B4J1Z2 117 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 A0A1B0GV50 99 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 TCRBV16S1A1N1A0A5B0 115 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 SNRPGP15A8MWD9 76 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 MASP2O00187 686 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 RRADP55042 308 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 ABCA11PQ4W5N1 156 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 KLHDC1Q8N7A1 406 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 PAPOLGQ9BWT3 736 aaKnown RBP4.41□□□□□ -1.7
SMAD4-202ENST00000398417 PTRH2Q9Y3E5 179 aaKnown RBP4.41□□□□□ -1.7
SMAD4-202ENST00000398417 SULT2B1O00204 365 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 FADS1O60427 444 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 HLA-AP01891 365 aaKnown RBP4.41□□□□□ -1.7
SMAD4-202ENST00000398417 P04436 131 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 UBBP0CG47 229 aa4.41□□□□□ -1.7
SMAD4-202ENST00000398417 UBCP0CG48 685 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms