RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 KCNG3Q8TAE7 436 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 SMCO4Q9NRQ5 59 aa13.12□□□□□ -0.31
CCNF-202ENST00000397066 ARPC4-TTLL3A0A0A6YYG9 625 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 SOCS1O15524 211 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 LINC01565O15544 149 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 WISP1O95388 367 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 CPT2P23786 658 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 CFPP27918 469 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 SRSF4Q08170 494 aaKnown RBP13.11□□□□□ -0.31
CCNF-202ENST00000397066 RPL7L1Q6DKI1 246 aaKnown RBP13.11□□□□□ -0.31
CCNF-202ENST00000397066 TMPRSS9Q7Z410 1059 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 PNLDC1Q8NA58 520 aaKnown RBP13.11□□□□□ -0.31
CCNF-202ENST00000397066 EIF5A2Q9GZV4 153 aaKnown RBP13.11□□□□□ -0.31
CCNF-202ENST00000397066 RGCCQ9H4X1 137 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 ESRP2Q9H6T0 727 aaKnown RBP13.11□□□□□ -0.31
CCNF-202ENST00000397066 H0YIG0 161 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 FGF16O43320 207 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 DXOO77932 396 aaKnown RBP13.11□□□□□ -0.31
CCNF-202ENST00000397066 DHPSP49366 369 aaPredicted RBP13.11□□□□□ -0.31
CCNF-202ENST00000397066 PRSS54Q6PEW0 395 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 RTN4RL2Q86UN3 420 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 C7orf61Q8IZ16 206 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 NRIP2Q9BQI9 281 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 LHX6Q9UPM6 363 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 CLDN16Q9Y5I7 305 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 SPTY2D1-AS1A0A0U1RR47 76 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 A0A1B0GV50 99 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 ALG1L2C9J202 215 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 SFT2D2O95562 160 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 TSPAN15O95858 294 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 HLA-GP17693 338 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 ITGA3P26006 1051 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 GUCA1AP43080 201 aaPredicted RBP13.11□□□□□ -0.31
CCNF-202ENST00000397066 B2MP61769 119 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 HSF1Q00613 529 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 OR4A4PQ8NGN8 299 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 LILRB1Q8NHL6 650 aaPredicted RBP13.11□□□□□ -0.31
CCNF-202ENST00000397066 C11orf40Q8WZ69 217 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 AKR1E2Q96JD6 320 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 RNF126Q9BV68 326 aa13.11□□□□□ -0.31
CCNF-202ENST00000397066 IGHV5-51A0A0C4DH38 117 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 LDLRAD4O15165 306 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 ZNF354AO60765 605 aaPredicted RBP13.1□□□□□ -0.31
CCNF-202ENST00000397066 IFNA21P01568 189 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 GLRA1P23415 457 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 ABCD3P28288 659 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 CAPZBP47756 277 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 NAAAQ02083 359 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 IAH1Q2TAA2 248 aaPredicted RBP13.1□□□□□ -0.31
CCNF-202ENST00000397066 PTCRAQ6ISU1 281 aaPredicted RBP13.1□□□□□ -0.31
CCNF-202ENST00000397066 H1FNTQ75WM6 255 aaPredicted RBP13.1□□□□□ -0.31
CCNF-202ENST00000397066 HOGA1Q86XE5 327 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 ARL5BQ96KC2 179 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 MUC22E2RYF6 1773 aaPredicted RBP13.1□□□□□ -0.31
CCNF-202ENST00000397066 K7EPK0 472 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 FBLP22087 321 aaKnown RBP13.1□□□□□ -0.31
CCNF-202ENST00000397066 FZD2Q14332 565 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 ACTBL2Q562R1 376 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 PAQR4Q8N4S7 273 aaPredicted RBP13.1□□□□□ -0.31
CCNF-202ENST00000397066 FAM71E2Q8N5Q1 922 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 BHLHE23Q8NDY6 225 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 RAB18Q9NP72 206 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 CARHSP1Q9Y2V2 147 aaKnown RBP13.1□□□□□ -0.31
CCNF-202ENST00000397066 LTBP2Q14767 1821 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 H0YIZ8 118 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 CLPSP04118 112 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 Q6ZRG5 221 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 TMEM104Q8NE00 496 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 CD300LFQ8TDQ1 290 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 C2orf50Q96LR7 162 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 C20orf24Q9BUV8 137 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 MMACHCQ9Y4U1 282 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 RHPN2P1A8MT19 583 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 TTRP02766 147 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 IFNA4P05014 189 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 ISG15P05161 165 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 CD79AP11912 226 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 RCC1P18754 421 aaPredicted RBP13.1□□□□□ -0.31
CCNF-202ENST00000397066 OR3A4PP47883 348 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 SLC6A9P48067 706 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 SLC16A13Q7RTY0 426 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 OR56B1Q8NGI3 324 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 ARHGAP5-AS1Q96IT6 56 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 WWTR1Q9GZV5 400 aa13.1□□□□□ -0.31
CCNF-202ENST00000397066 DENND4AQ7Z401 1863 aa13.09□□□□□ -0.31
CCNF-202ENST00000397066 BCKDHBP21953 392 aa13.09□□□□□ -0.31
CCNF-202ENST00000397066 C16orf47Q6ZP98 133 aaPredicted RBP13.09□□□□□ -0.31
CCNF-202ENST00000397066 ARRDC1Q8N5I2 433 aa13.09□□□□□ -0.31
CCNF-202ENST00000397066 RHBDD3Q9Y3P4 386 aa13.09□□□□□ -0.31
CCNF-202ENST00000397066 UNC80Q8N2C7 3258 aa13.09□□□□□ -0.31
CCNF-202ENST00000397066 IGHV3-20A0A0C4DH32 117 aa13.09□□□□□ -0.31
CCNF-202ENST00000397066 HIST1H1DP16402 221 aaKnown RBP13.09□□□□□ -0.31
CCNF-202ENST00000397066 PTGFRP43088 359 aa13.09□□□□□ -0.31
CCNF-202ENST00000397066 CAV2P51636 162 aa13.09□□□□□ -0.31
CCNF-202ENST00000397066 SNU13P55769 128 aaKnown RBP13.09□□□□□ -0.31
CCNF-202ENST00000397066 C5orf66Q9H5L9 145 aa13.09□□□□□ -0.31
CCNF-202ENST00000397066 A0A1W2PP11 408 aa13.09□□□□□ -0.31
CCNF-202ENST00000397066 VSTM2BA6NLU5 285 aa13.09□□□□□ -0.31
CCNF-202ENST00000397066 FAM57BQ71RH2 274 aa13.09□□□□□ -0.31
CCNF-202ENST00000397066 C9orf40Q8IXQ3 194 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms