RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SERPINA7P05543 415 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 UBBP0CG47 229 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 PRF1P14222 555 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 MPLP40238 635 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 ZNF84P51523 738 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 MRPS34P82930 218 aaKnown RBP14.78□□□□□ -0.04
NUP50-202ENST00000396096 LPAL2Q16609 132 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 TRAPPC6BQ86SZ2 158 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 KCNG3Q8TAE7 436 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 CMBLQ96DG6 245 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 PGAM5Q96HS1 289 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 SLC6A7Q99884 636 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 PRRT1Q99946 306 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 LPAR5Q9H1C0 372 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 FARSAQ9Y285 508 aaKnown RBP14.78□□□□□ -0.04
NUP50-202ENST00000396096 V9GYS6 101 aa14.78□□□□□ -0.04
NUP50-202ENST00000396096 PCSK5Q92824 1860 aa14.77□□□□□ -0.04
NUP50-202ENST00000396096 WDR87Q6ZQQ6 2873 aa14.77□□□□□ -0.04
NUP50-202ENST00000396096 LRRC3CA6NJW4 275 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 IFNA7P01567 189 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 APOC1P02654 83 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 OR4E1P0C645 316 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 TBPP20226 339 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 ENPP1P22413 925 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 SSTR2P30874 369 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 THBS4P35443 961 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 H2BFSP57053 126 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 FAM189A2Q15884 450 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 RSPO1Q2MKA7 263 aaPredicted RBP14.77□□□□□ -0.05
NUP50-202ENST00000396096 C2orf68Q2NKX9 166 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 ATPAF1Q5TC12 328 aaPredicted RBP14.77□□□□□ -0.05
NUP50-202ENST00000396096 FAM27BQ5VT28 67 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 TCEAL6Q6IPX3 200 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 GLIPR1L1Q6UWM5 242 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 CHMP1BQ7LBR1 199 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 RNF144BQ7Z419 303 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 GGNQ86UU5 652 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 CHST4Q8NCG5 386 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 OR13C8Q8NGS7 320 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 TCEAL3Q969E4 200 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 LYZL4Q96KX0 146 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 DPCDQ9BVM2 203 aaPredicted RBP14.77□□□□□ -0.05
NUP50-202ENST00000396096 ULBP2Q9BZM5 246 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 ANAPC10Q9UM13 185 aa14.77□□□□□ -0.05
NUP50-202ENST00000396096 NCKAP5O14513 1909 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 LINC00862A6NCI5 91 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 HMSDA8MTL9 139 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 E9PLN8 166 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 F5H5P2 479 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 GSTP1P09211 210 aaKnown RBP14.76□□□□□ -0.05
NUP50-202ENST00000396096 ECH1Q13011 328 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 GRK1Q15835 563 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 C4orf46Q504U0 113 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 RNASE10Q5GAN6 216 aaKnown RBP14.76□□□□□ -0.05
NUP50-202ENST00000396096 ACER2Q5QJU3 275 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 B3GNTL1Q67FW5 361 aaPredicted RBP14.76□□□□□ -0.05
NUP50-202ENST00000396096 ZNF101Q8IZC7 436 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 TNFAIP8L1Q8WVP5 186 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 IGKV1-9A0A0C4DH69 117 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 OR5H15A6NDH6 313 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 OR6C65A6NJZ3 312 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 CDC14BO60729 498 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 NOS1APO75052 506 aaPredicted RBP14.76□□□□□ -0.05
NUP50-202ENST00000396096 CXCL2P19875 107 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 HOXD11P31277 338 aaPredicted RBP14.76□□□□□ -0.05
NUP50-202ENST00000396096 CASRP41180 1078 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 ALDH3B1P43353 468 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 OR3A4PP47883 348 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 HYAL4Q2M3T9 481 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 RAB11FIP2Q7L804 512 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 OR4S1Q8NGB4 309 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 OR14L1PQ8NHC6 308 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 C10orf35Q96D05 121 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 WDR89Q96FK6 387 aaPredicted RBP14.76□□□□□ -0.05
NUP50-202ENST00000396096 ADGRG7Q96K78 797 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 RBM24Q9BX46 236 aaKnown RBP14.76□□□□□ -0.05
NUP50-202ENST00000396096 IRF2BPLQ9H1B7 796 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 ARRDC1-AS1Q9H2J1 176 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 AUP1Q9Y679 476 aa14.76□□□□□ -0.05
NUP50-202ENST00000396096 A0A0A6YYD4 124 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 C5orf63A6NC05 138 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 ZNF716A6NP11 495 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 MCRIP1C9JLW8 97 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 M0R233 179 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 GOSR2O14653 212 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 SSX5O60225 188 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 DHRS3O75911 302 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 HCKP08631 526 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 ZNF35P13682 527 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 NFYAP23511 347 aaPredicted RBP14.75□□□□□ -0.05
NUP50-202ENST00000396096 OPCMLQ14982 345 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 YRDCQ86U90 279 aaKnown RBP14.75□□□□□ -0.05
NUP50-202ENST00000396096 C12orf45Q8N5I9 185 aaPredicted RBP14.75□□□□□ -0.05
NUP50-202ENST00000396096 ESX1Q8N693 406 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 ZDHHC22Q8N966 263 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 NUDCD2Q8WVJ2 157 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 SPACA5Q96QH8 159 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 SELENOIQ9C0D9 397 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 P4HTMQ9NXG6 502 aa14.75□□□□□ -0.05
NUP50-202ENST00000396096 GHRLQ9UBU3 117 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms