RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 PMPCAQ10713 525 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 CHAF1BQ13112 559 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 FAM74A3Q4VXF1 159 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 SHEQ5VZ18 495 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 TMEM123Q8N131 208 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 ZIC4Q8N9L1 334 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 OR51S1Q8NGJ8 323 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 OR52B4Q8NGK2 314 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 OR13C9Q8NGT0 318 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 OR8S1Q8NH09 359 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 WNT2BQ93097 391 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 TMEM54Q969K7 222 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 TMEM138Q9NPI0 162 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 GPR160Q9UJ42 338 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 SLC5A6Q9Y289 635 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 A0A1W2PNU3 283 aaPredicted RBP12.31□□□□□ -0.44
SNCA-204ENST00000394989 ZNF883P0CG24 379 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 RBMS2Q15434 407 aaKnown RBP12.31□□□□□ -0.44
SNCA-204ENST00000394989 MEIOBQ8N635 442 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 OR9K2Q8NGE7 335 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 PTX4Q96A99 478 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 DMRTA2Q96SC8 542 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 MOB1AQ9H8S9 216 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 PFDN2Q9UHV9 154 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 SCP2D1Q9UJQ7 156 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 WDPCPO95876 746 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 SP9P0CG40 484 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 AKAIN1P0CW23 69 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 RAC1P63000 192 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 FAM74A1Q5RGS3 127 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 C10orf128Q5T292 105 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 ZNF626Q68DY1 528 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 C6orf15Q6UXA7 325 aaPredicted RBP12.3□□□□□ -0.44
SNCA-204ENST00000394989 ABHD12BQ7Z5M8 362 aaPredicted RBP12.3□□□□□ -0.44
SNCA-204ENST00000394989 NABP1Q96AH0 204 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 FOXRED1Q96CU9 486 aaPredicted RBP12.3□□□□□ -0.44
SNCA-204ENST00000394989 GINS4Q9BRT9 223 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 SPRY4Q9C004 299 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 AUP1Q9Y679 476 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 A0A1B0GVI7 797 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 EIF1BO60739 113 aaKnown RBP12.3□□□□□ -0.44
SNCA-204ENST00000394989 RFPL3SP0C7P2 107 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 FAUP35544 74 aaKnown RBP12.3□□□□□ -0.44
SNCA-204ENST00000394989 CSNK1A1P48729 337 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 CX3CR1P49238 355 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 ZNF133P52736 654 aaPredicted RBP12.3□□□□□ -0.44
SNCA-204ENST00000394989 ELP2Q6IA86 826 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 RAB11FIP2Q7L804 512 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 SLC36A1Q7Z2H8 476 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 NAA40Q86UY6 237 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 ACBD4Q8NC06 268 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 OR5D14Q8NGL3 314 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 SGCZQ96LD1 299 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 GPR84Q9NQS5 396 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 FOXD3Q9UJU5 478 aaPredicted RBP12.3□□□□□ -0.44
SNCA-204ENST00000394989 RAB27BO00194 218 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 IGHEP01854 428 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 CPN1P15169 458 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 ZP3P21754 424 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 ENDOGQ14249 297 aaKnown RBP12.3□□□□□ -0.44
SNCA-204ENST00000394989 TAF13Q15543 124 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 SGCAQ16586 387 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 IGSF11Q5DX21 431 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 H3F3CQ6NXT2 135 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 STEAP1BQ6NZ63 245 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 YRDCQ86U90 279 aaKnown RBP12.3□□□□□ -0.44
SNCA-204ENST00000394989 DTX1Q86Y01 620 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 OR6N1Q8NGY5 312 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 CMBLQ96DG6 245 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 ZNF837Q96EG3 531 aaPredicted RBP12.3□□□□□ -0.44
SNCA-204ENST00000394989 SPACA5Q96QH8 159 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 USB1Q9BQ65 265 aaKnown RBP12.3□□□□□ -0.44
SNCA-204ENST00000394989 PIGQQ9BRB3 760 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 DEPPQ9NTK1 212 aa12.3□□□□□ -0.44
SNCA-204ENST00000394989 TMEM235A6NFC5 223 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 VSIG8P0DPA2 414 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 RAB6AP20340 208 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 NTF4P34130 210 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 SSBP1Q04837 148 aaKnown RBP12.29□□□□□ -0.44
SNCA-204ENST00000394989 FOXL2NBQ6ZUU3 175 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 RTN4RL2Q86UN3 420 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 GABRG1Q8N1C3 465 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 LILRB1Q8NHL6 650 aaPredicted RBP12.29□□□□□ -0.44
SNCA-204ENST00000394989 FAM46BQ96A09 425 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 SHARPINQ9H0F6 387 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 PIPOXQ9P0Z9 390 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 KLK13Q9UKR3 277 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 LRRC3CA6NJW4 275 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 C9orf172C9J069 976 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 NPIPA2E9PIF3 369 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 NPIPA3F8WFD2 350 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 M0R296 226 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 SULT1C2O00338 296 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 BET1O15155 118 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 TLX3O43711 291 aaPredicted RBP12.29□□□□□ -0.44
SNCA-204ENST00000394989 VAMP5O95183 116 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 IL5P05113 134 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 NMBP08949 121 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 RAB3AP20336 220 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 LSM6P62312 80 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms