RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 B4E171 279 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 SPRED1Q7Z699 444 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 OR2A25A4D2G3 310 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 SSR4P51571 173 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 VRK2Q86Y07 508 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 OR2T10Q8NGZ9 312 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 PIPOXQ9P0Z9 390 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 SHPRHQ149N8 1683 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 LOC107984156A0A0G2JMH3 177 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 CD14P08571 375 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 GABRA6Q16445 453 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 ARL17AQ8IVW1 177 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 EDAQ92838 391 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 PRSS16Q9NQE7 514 aa12.26□□□□□ -0.45
USP49-203ENST00000394253 KIR2DS5A0A0G2JLQ3 304 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 A0A0G2JNG1 304 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 KIR2DS3K7RE56 304 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 CA2P00918 260 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 SP1P08047 785 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 RHOBP62745 196 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 KIR2DS5Q14953 304 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 TMEM128Q5BJH2 165 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 AAED1Q7RTV5 226 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 GRASPQ7Z6J2 395 aaPredicted RBP12.25□□□□□ -0.45
USP49-203ENST00000394253 MYPOPQ86VE0 399 aaPredicted RBP12.25□□□□□ -0.45
USP49-203ENST00000394253 OPALINQ96PE5 141 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 IGSF5Q9NSI5 407 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 CBR3O75828 277 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 CER1O95813 267 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 RPA2P15927 270 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 KCNJ10P78508 379 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 RIGQ13278 110 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 OR2B11Q5JQS5 317 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 ZCCHC14Q8WYQ9 949 aaKnown RBP12.25□□□□□ -0.45
USP49-203ENST00000394253 MIOXQ9UGB7 285 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 GLRA1P23415 457 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 PPP1CAP62136 330 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 RPS16P62249 146 aaKnown RBP12.25□□□□□ -0.45
USP49-203ENST00000394253 EGR3Q06889 387 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 IHHQ14623 411 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 LBX2Q6XYB7 198 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 DEFB119Q8N690 84 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 NAGKQ9UJ70 344 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 NUP188Q5SRE5 1749 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 ANK1P16157 1881 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 A0A1W2PQU0 124 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 C14orf80Q86SX3 495 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 SCAMP4Q969E2 229 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 SPAG8Q99932 426 aaPredicted RBP12.25□□□□□ -0.45
USP49-203ENST00000394253 PGA3P0DJD8 388 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 CIRBPQ14011 172 aaKnown RBP12.25□□□□□ -0.45
USP49-203ENST00000394253 RBPMS2Q6ZRY4 209 aaKnown RBP12.25□□□□□ -0.45
USP49-203ENST00000394253 MRPS24Q96EL2 167 aaKnown RBP12.25□□□□□ -0.45
USP49-203ENST00000394253 TMEM208Q9BTX3 173 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 SLC7A10Q9NS82 523 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 UBE2MP61081 183 aaKnown RBP12.25□□□□□ -0.45
USP49-203ENST00000394253 SLC38A5Q8WUX1 472 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 MAP6Q96JE9 813 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 UTP23Q9BRU9 249 aaKnown RBP12.25□□□□□ -0.45
USP49-203ENST00000394253 Q9N2K0 584 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 GRPP07492 148 aa12.25□□□□□ -0.45
USP49-203ENST00000394253 JUNBP17275 347 aaPredicted RBP12.25□□□□□ -0.45
USP49-203ENST00000394253 RACK1P63244 317 aaKnown RBP12.25□□□□□ -0.45
USP49-203ENST00000394253 NDUFS8O00217 210 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 P2RY10O00398 339 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 PGA4P0DJD7 388 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 PGA5P0DJD9 388 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 CST6Q15828 149 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 NEIL2Q969S2 332 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 TMEM56Q96MV1 263 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 SPATA6Q9NWH7 488 aaPredicted RBP12.24□□□□□ -0.45
USP49-203ENST00000394253 DOCK5Q9H7D0 1870 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 ZNF737O75373 536 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 ISG20Q96AZ6 181 aaKnown RBP12.24□□□□□ -0.45
USP49-203ENST00000394253 NTNG2Q96CW9 530 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 IL17BQ9UHF5 180 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 PTRH2Q9Y3E5 179 aaKnown RBP12.24□□□□□ -0.45
USP49-203ENST00000394253 CRYABP02511 175 aaKnown RBP12.24□□□□□ -0.45
USP49-203ENST00000394253 AOAHP28039 575 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 OR52I2Q8NH67 350 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 CTRCQ99895 268 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 PSMG3Q9BT73 122 aaPredicted RBP12.24□□□□□ -0.45
USP49-203ENST00000394253 TRAPPC4Q9Y296 219 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 FAM74A7A6NL05 159 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 ACHEP22303 614 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 KIR2DL1P43626 348 aaPredicted RBP12.24□□□□□ -0.45
USP49-203ENST00000394253 KIR2DL2P43627 348 aaPredicted RBP12.24□□□□□ -0.45
USP49-203ENST00000394253 PARD6GQ9BYG4 376 aaPredicted RBP12.24□□□□□ -0.45
USP49-203ENST00000394253 SPHK2Q9NRA0 654 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 SLC25A5P05141 298 aaKnown RBP12.24□□□□□ -0.45
USP49-203ENST00000394253 NAT8Q9UHE5 227 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 A0A1B0GUL6 1792 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 ACOT8O14734 319 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 JOSD1Q15040 202 aaPredicted RBP12.24□□□□□ -0.45
USP49-203ENST00000394253 DCXRQ7Z4W1 244 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 OR5AS1Q8N127 324 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 C11orf40Q8WZ69 217 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 GRAMD2BQ96HH9 432 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 WFIKKN1Q96NZ8 548 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 DDNO94850 711 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms