RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 CPN1P15169 458 aa12.98□□□□□ -0.33
CDH16-202ENST00000394055 CSNK1A1P48729 337 aa12.98□□□□□ -0.33
CDH16-202ENST00000394055 HOXA1P49639 335 aaPredicted RBP12.98□□□□□ -0.33
CDH16-202ENST00000394055 IKZF1Q13422 519 aa12.98□□□□□ -0.33
CDH16-202ENST00000394055 HIST3H3Q16695 136 aa12.98□□□□□ -0.33
CDH16-202ENST00000394055 RSPO4Q2I0M5 234 aaPredicted RBP12.98□□□□□ -0.33
CDH16-202ENST00000394055 SCGB2B2Q4G0G5 96 aa12.98□□□□□ -0.33
CDH16-202ENST00000394055 SLC22A6Q4U2R8 563 aa12.98□□□□□ -0.33
CDH16-202ENST00000394055 C4orf46Q504U0 113 aa12.98□□□□□ -0.33
CDH16-202ENST00000394055 CLLU1Q5K131 121 aa12.98□□□□□ -0.33
CDH16-202ENST00000394055 AWAT2Q6E213 333 aa12.98□□□□□ -0.33
CDH16-202ENST00000394055 SLC22A24Q8N4F4 322 aa12.98□□□□□ -0.33
CDH16-202ENST00000394055 NECAB3Q96P71 396 aaPredicted RBP12.98□□□□□ -0.33
CDH16-202ENST00000394055 LOC100509620A0A075B734 347 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 RPS10-NUDT3A0A1W2PQS6 291 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 UBE2QL1A1L167 161 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 SNRPGP15A8MWD9 76 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 E9PLN8 166 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 TLX3O43711 291 aaPredicted RBP12.97□□□□□ -0.33
CDH16-202ENST00000394055 STK17BO94768 372 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 MPC2O95563 127 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 VSIG8P0DPA2 414 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 MECP2P51608 486 aaKnown RBP12.97□□□□□ -0.33
CDH16-202ENST00000394055 DSCR4P56555 118 aaPredicted RBP12.97□□□□□ -0.33
CDH16-202ENST00000394055 MLF1P58340 268 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 FLI1Q01543 452 aaPredicted RBP12.97□□□□□ -0.33
CDH16-202ENST00000394055 SLC23A3Q6PIS1 610 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 SPICQ8N5J4 248 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 GVQW1Q8N7I0 195 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 NUDCD2Q8WVJ2 157 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 FOXRED1Q96CU9 486 aaPredicted RBP12.97□□□□□ -0.33
CDH16-202ENST00000394055 CYYR1Q96J86 154 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 ZC3H10Q96K80 434 aaKnown RBP12.97□□□□□ -0.33
CDH16-202ENST00000394055 A0A087WZY1 265 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 METTL21EPA6NDL7 271 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 ZNF736B4DX44 427 aaPredicted RBP12.97□□□□□ -0.33
CDH16-202ENST00000394055 NPIPA2E9PIF3 369 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 NPIPA3F8WFD2 350 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 RAB27BO00194 218 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 SSX5O60225 188 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 PMS2P2O95744 297 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 LIPCP11150 499 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 ZNF93P35789 620 aaPredicted RBP12.97□□□□□ -0.33
CDH16-202ENST00000394055 H3F3AP84243 136 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 YRDCQ86U90 279 aaKnown RBP12.97□□□□□ -0.33
CDH16-202ENST00000394055 FJX1Q86VR8 437 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 ANGPTL5Q86XS5 388 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 ZNF101Q8IZC7 436 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 TNFAIP8L1Q8WVP5 186 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 POFUT1Q9H488 388 aa12.97□□□□□ -0.33
CDH16-202ENST00000394055 LINC00587B1AMM8 73 aa12.96□□□□□ -0.33
CDH16-202ENST00000394055 GOSR2O14653 212 aa12.96□□□□□ -0.33
CDH16-202ENST00000394055 ZP3P21754 424 aa12.96□□□□□ -0.33
CDH16-202ENST00000394055 H2BFSP57053 126 aa12.96□□□□□ -0.33
CDH16-202ENST00000394055 RAB14P61106 215 aa12.96□□□□□ -0.33
CDH16-202ENST00000394055 C17orf107Q6ZR85 190 aa12.96□□□□□ -0.33
CDH16-202ENST00000394055 CD163Q86VB7 1156 aa12.96□□□□□ -0.33
CDH16-202ENST00000394055 TMEM229BQ8NBD8 167 aa12.96□□□□□ -0.33
CDH16-202ENST00000394055 RHBDD1Q8TEB9 315 aa12.96□□□□□ -0.33
CDH16-202ENST00000394055 LINC00052Q96N35 136 aa12.96□□□□□ -0.33
CDH16-202ENST00000394055 NICN1Q9BSH3 213 aa12.96□□□□□ -0.33
CDH16-202ENST00000394055 RBM24Q9BX46 236 aaKnown RBP12.96□□□□□ -0.33
CDH16-202ENST00000394055 RAB22AQ9UL26 194 aa12.96□□□□□ -0.33
CDH16-202ENST00000394055 AHCTF1Q8WYP5 2266 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 A0A0J9YW62 118 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 OR5H15A6NDH6 313 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 F5H5K5 113 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 APOC1P02654 83 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 GIPP09681 153 aaPredicted RBP12.96□□□□□ -0.34
CDH16-202ENST00000394055 ZNF35P13682 527 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 GNB3P16520 340 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 TCN2P20062 427 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 NUP62P37198 522 aaPredicted RBP12.96□□□□□ -0.34
CDH16-202ENST00000394055 SLC6A9P48067 706 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 DCAF12L2Q5VW00 463 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 OR52W1Q6IF63 320 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 TFAP2EQ6VUC0 442 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 ZNF584Q8IVC4 421 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 CCDC36Q8IYA8 594 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 NPRL2Q8WTW4 380 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 MS4A7Q9GZW8 240 aaPredicted RBP12.96□□□□□ -0.34
CDH16-202ENST00000394055 SHARPINQ9H0F6 387 aa12.96□□□□□ -0.34
CDH16-202ENST00000394055 SULT1C2O00338 296 aa12.95□□□□□ -0.34
CDH16-202ENST00000394055 GUCA1AP43080 201 aaPredicted RBP12.95□□□□□ -0.34
CDH16-202ENST00000394055 OR3A4PP47883 348 aa12.95□□□□□ -0.34
CDH16-202ENST00000394055 Q0VFX4 171 aa12.95□□□□□ -0.34
CDH16-202ENST00000394055 ZNF239Q16600 458 aaKnown RBP12.95□□□□□ -0.34
CDH16-202ENST00000394055 CDNFQ49AH0 187 aa12.95□□□□□ -0.34
CDH16-202ENST00000394055 PPP1R32Q7Z5V6 425 aa12.95□□□□□ -0.34
CDH16-202ENST00000394055 TRAPPC6BQ86SZ2 158 aa12.95□□□□□ -0.34
CDH16-202ENST00000394055 BPIFB2Q8N4F0 458 aa12.95□□□□□ -0.34
CDH16-202ENST00000394055 TMEM105Q8N8V8 129 aa12.95□□□□□ -0.34
CDH16-202ENST00000394055 OR9K2Q8NGE7 335 aa12.95□□□□□ -0.34
CDH16-202ENST00000394055 ZNF837Q96EG3 531 aaPredicted RBP12.95□□□□□ -0.34
CDH16-202ENST00000394055 ELMOD3Q96FG2 381 aa12.95□□□□□ -0.34
CDH16-202ENST00000394055 LIN37Q96GY3 246 aaPredicted RBP12.95□□□□□ -0.34
CDH16-202ENST00000394055 RADILQ96JH8 1075 aa12.95□□□□□ -0.34
CDH16-202ENST00000394055 SRXN1Q9BYN0 137 aa12.95□□□□□ -0.34
CDH16-202ENST00000394055 SH2D2AQ9NP31 389 aa12.95□□□□□ -0.34
CDH16-202ENST00000394055 A0A1W2PP11 408 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms