RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ARSBP15848 533 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 MAP2K3P46734 347 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR3A2P47893 321 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 PTH2RP49190 550 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 FOXG1P55316 489 aaPredicted RBP9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 HGFACQ04756 655 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 PLA2G7Q13093 441 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 SNAI3Q3KNW1 292 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 PABPC1L2AQ5JQF8 200 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 FBXW9Q5XUX1 488 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 MZT2BQ6NZ67 158 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 RPUSD3Q6P087 351 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 ZNF554Q86TJ5 538 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 SPACA3Q8IXA5 215 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 IZUMO1Q8IYV9 350 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR52N4Q8NGI2 321 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 ZC3HAV1LQ96H79 300 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 RBFOX1Q9NWB1 397 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 PRSS50Q9UI38 385 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 FRYQ5TBA9 3013 aa9.99□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR14I1A6ND48 311 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 DHRS7CA6NNS2 312 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 LDLRAD4O15165 306 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 XRCC3O43542 346 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 CTAG2O75638 210 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 COX5BP10606 129 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 MPGP29372 298 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 THBS4P35443 961 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 MRPS10P82664 201 aaKnown RBP9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 DGCR2P98153 550 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 GUSBP1Q15486 140 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 C9orf135Q5VTT2 229 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 ZNF57Q68EA5 555 aaPredicted RBP9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR5AS1Q8N127 324 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 RBMXL3Q8N7X1 1067 aaKnown RBP9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 PTX4Q96A99 478 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 SGK3Q96BR1 496 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 NEDD4LQ96PU5 975 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 TRIB1Q96RU8 372 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 C12orf49Q9H741 205 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 CNTD2Q9H8S5 307 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 ZNF391Q9UJN7 358 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 A0A096LPE4 126 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 A0A1W2PPZ6 126 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 GABARAPH6UMI1 98 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 ALX3O95076 343 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 ALDOBP05062 364 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 TMIGD3P0DMS9 266 aaPredicted RBP9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 GABRA1P14867 456 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 EFNB2P52799 333 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 TAS2R20P59543 309 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 DPPA2Q7Z7J5 298 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 CADM3Q8N126 398 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR4D6Q8NGJ1 314 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 PP6455Q8WZ26 134 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 NKX3-1Q99801 234 aaPredicted RBP9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 RGCCQ9H4X1 137 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 RNF121Q9H920 327 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 DCHS1Q96JQ0 3298 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 RTTNQ86VV8 2226 aa9.98□□□□□ -0.81
SMARCAL1-203ENST00000392128 AHRRA9YTQ3 701 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 MKRN2OSH3BPM6 223 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 ARR3P36575 388 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 UTS2BQ765I0 119 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 CPEB3Q8NE35 698 aaKnown RBP9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 ENKURQ8TC29 256 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 SSC4DQ8WTU2 575 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 WNT2BQ93097 391 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 KCNK15Q9H427 330 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 DIABLOQ9NR28 239 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 CIB4A0PJX0 185 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 GGT3PA6NGU5 568 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 BPNT1O95861 308 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 IL18BPO95998 194 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 LCATP04180 440 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 CD3GP09693 182 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 FAM157BP0CG42 384 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 RAB6AP20340 208 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 ZNF93P35789 620 aaPredicted RBP9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 KIR2DL3P43628 341 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 CELF2-AS1Q8N7Q2 184 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 DUSP18Q8NEJ0 188 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR1K1Q8NGR3 316 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 REEP6Q96HR9 211 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 DOCK7Q96N67 2140 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 C1QTNF5Q9BXJ0 243 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 CHST5Q9GZS9 411 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 DKK4Q9UBT3 224 aa9.97□□□□□ -0.81
SMARCAL1-203ENST00000392128 IGKV1-9A0A0C4DH69 117 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 K7EM74 188 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 HLA-HP01893 362 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 CRYABP02511 175 aaKnown RBP9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 ACSF3Q4G176 576 aaPredicted RBP9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 TFAP2EQ6VUC0 442 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 DNM1P46Q6ZS02 220 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 COLCA1Q6ZS62 124 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 FAM214BQ7L5A3 538 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 BIVMQ86UB2 503 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 TOMM5Q8N4H5 51 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 SEMA6DQ8NFY4 1073 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms